Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2464 ATGGTCAGTTTTACTATTTCAATTTTCTCTATATTAAATGCAACAGGGTTGTGTAAGAGCAACTCAATGGTCTCTGCAAAAAATCATAATAAAAAAAAAGCTGTTATGTTACATGATAATTGCCTGCTAAACTATTTGATTCTACTCCTTTGGACAATCTCTTTTTCCTCTTGTTCTACTGATACCATATCTACTGACAAGCCTATAAAAGATGGTGAGCTTCTTGTTTCTAAATCTAAAACCTTTGCTCTTGGATTCTTCACTCCTGGAAAGTCCACCTCTCGCTATGTTGGAATTTGGTACTACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAATAGAGATACTCCAATCAATGATACTTCTGGAATTCTATCAATCGACCCGACTGGAAATCTAGTACTCCACCACAACCTCAGCACCATTCCCATTTGGTCTACCAGTGTTTCATTAACACAATCACAGAGAAATATCACCAGCGTTATAGCTCAACTATCGGATATAGCAAACCTTGTTCTGAAGCTAAACAACACCAAAACTGACATCTGGGAAAGCTTTGATCATCCAACAGACACCTGGCTTCCATATCAAAGACTTGGTTTTGATAGAAAGAATAATCAAAGTTTGTTTCTTCAATCCTGGAAGACAGATGATGATCCTGGAAAAGGTGCATTCACAGTAAATTTCAGCACCATTGGTAAACCTCAGTTGTTTATGTACAACCATGATCTTTCTTGGTGGCGTGGTGGACATTGGAACGGAGAATTATTTGTAGGCCAACCTTATATGAAACGAGATATGCCCTTTTATAACATTTCTTTGGTTGAAGAAGACAACTATGTAGCACTAACATATAACTTGTATGATACGTCTGTCATTCTTAGGATAGTGCTTCAGCAATCTGGGTTCTTTCAATTATTCAAGTGGGACAGTCATGAGAGCCAATGGAACCAGTACTGGTCTGAACCAACAGACCACTGTGATAACTATGGAACTTGTGGATCAAACAGTAATTGTGATCCTTTGAACTTGGAGAACTTTAAGTGTACATGTTTACCTGGTTTTGAACCCAGATATCCACGTGATTGGTATGACAGTAGAGACGGGTCAGGAGGGTGTGTTAGGAATAAAAATGCATCTGTTTGTGGGAATGGAGAAGGGTTTGTGAAAGTTGTAAGCTTGAAAGTTCCTGATACATCTGTGGCAGTTGTTAAAGGTGGTTTAAGTTTGGAAGAATGTGAAAAAGAATGCTTCAGAAACTGCTCTTGTACTGCGTATGCCGTTGCTGATGTGACAAATAGTGGAAGTGGTTGTTTGGCATGGTATGGGGATTTAATGGACATTCAGAAACTTAGTGATCAACGCCAGGATTTGTTTTTACGCGTCGATAAAGTTGAACTAGCCAATTACTACAAAAAAAGTAAAGGAGTCCTTGATAAAAAATGGTTCGCTGCAATTCTGGTAGCTTCTATTGTTGCAACTGTTCTCCTCCTATCCTGTGTGTATATGTATTGCTGGCGGAAGAAAAAAAGAAAGGAAAAAATGATGCGGCAATTAAACCAAGATTCCTCTGGAGAAGAGAATGGTGCTCCACATCCAAATCTACCATTTTTCAACTTTAAGACAATAATGATAGCTACAAGAAATTGCGGTCATGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTGAAAAGATTATCCAAAGATTCAGGTCAAGGCAAAGAAGAATTTAAAAACGAAGTTACACTTTTAGTTAAACTCCAACACAGAAATCTAGTGAGATTGCTCGGCTGTTGCTTTGAAAAAGAAGAAAGGATGCTAGTTTACGAATACCTACCCAACAAAAGCCTAGACTTCTTCATATTCGATCAAAACCAAAGGTCATCATTGGGTTGGAGTAAGCGTTTTGAAATCATTTGTGGGATTGCTCGAGGTGTGTTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCCAGCAACCAAGAGGAACTACGACGTTACTTAGGATTTTAG 2076 0.3829 MVSFTISIFSILNATGLCKSNSMVSAKNHNKKKAVMLHDNCLLNYLILLLWTISFSSCSTDTISTDKPIKDGELLVSKSKTFALGFFTPGKSTSRYVGIWYYNLPIQTVVWVANRDTPINDTSGILSIDPTGNLVLHHNLSTIPIWSTSVSLTQSQRNITSVIAQLSDIANLVLKLNNTKTDIWESFDHPTDTWLPYQRLGFDRKNNQSLFLQSWKTDDDPGKGAFTVNFSTIGKPQLFMYNHDLSWWRGGHWNGELFVGQPYMKRDMPFYNISLVEEDNYVALTYNLYDTSVILRIVLQQSGFFQLFKWDSHESQWNQYWSEPTDHCDNYGTCGSNSNCDPLNLENFKCTCLPGFEPRYPRDWYDSRDGSGGCVRNKNASVCGNGEGFVKVVSLKVPDTSVAVVKGGLSLEECEKECFRNCSCTAYAVADVTNSGSGCLAWYGDLMDIQKLSDQRQDLFLRVDKVELANYYKKSKGVLDKKWFAAILVASIVATVLLLSCVYMYCWRKKKRKEKMMRQLNQDSSGEENGAPHPNLPFFNFKTIMIATRNCGHENKLGQGGFGSVYKGCLVNGQEIAVKRLSKDSGQGKEEFKNEVTLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDQNQRSSLGWSKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNQEELRRYLGF* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2464 691 Gene3D Phosphorylase Kinase; domain 1 527 626 - -
Psa7g2464 691 CDD B_lectin 66 190 IPR001480 -
Psa7g2464 691 CDD PAN_AP_plant 384 463 - -
Psa7g2464 691 Pfam S-locus glycoprotein domain 248 359 IPR000858 GO:0048544
Psa7g2464 691 SMART blect_4 66 190 IPR001480 -
Psa7g2464 691 Gene3D Transferase(Phosphotransferase) domain 1 627 682 - -
Psa7g2464 691 SUPERFAMILY Protein kinase-like (PK-like) 531 681 IPR011009 -
Psa7g2464 691 SMART ntp_6 384 463 IPR003609 -
Psa7g2464 691 SMART serkin_6 554 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2464 691 Gene3D Hepatocyte Growth Factor 380 461 - -
Psa7g2464 691 Pfam D-mannose binding lectin 108 216 IPR001480 -
Psa7g2464 691 ProSiteProfiles Bulb-type lectin domain profile. 60 187 IPR001480 -
Psa7g2464 691 ProSiteProfiles EGF-like domain profile. 324 362 IPR000742 -
Psa7g2464 691 Pfam PAN-like domain 383 449 IPR003609 -
Psa7g2464 691 Gene3D - 53 187 IPR036426 -
Psa7g2464 691 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 43 681 - -
Psa7g2464 691 ProSiteProfiles Protein kinase domain profile. 551 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2464 691 ProSitePatterns Protein kinases ATP-binding region signature. 557 579 IPR017441 GO:0005524
Psa7g2464 691 Pfam Protein tyrosine and serine/threonine kinase 554 681 IPR001245 GO:0004672|GO:0006468
Psa7g2464 691 CDD EGF_CA 326 360 - -
Psa7g2464 691 ProSiteProfiles PAN/Apple domain profile. 383 464 IPR003609 -
Psa7g2464 691 SUPERFAMILY alpha-D-mannose-specific plant lectins 109 221 IPR036426 -
Psa7g2464 691 PANTHER - 43 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2464 Psa-Chr7 174101267 174105214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2464 475 681 Receptor kinase-like Gene Family AT4G23190 52.174 1.60e-61 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa7g2464 PK_Tyr_Ser-Thr 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2464 - - mtr:MTR_4g091840 1061.6