Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2462 ATGGACTCTGCAAAAAATCTTCTCTACCTTGTCATAACCCAAAATCATAGATATAATAATTTGCAGCTAAACTGTTTGATCATATTCCTTTTCATATTCTCTTTTTGCTCTTGTTCTACTGATACCATATCTATTCACAAACCCATTACAGATGGTGGTGACCTCCTCGTTTCTAAATCTAAAACCTTTGCTCTTGGATTCTTCACTCCTGGAAAATCCACTTCTCGCTATGTTGGAATTTGGTACTACAATTTGCCAAATCAAACTGTTTGGGTTGCCAATAGAGATACTCCAATCAACGACACTTCTGGAATCCTATCAATCGACCCGAGTGGAAATCTAGTACTCCACCACAATCTCAGCACCATTCCAATTTGGTCTACCGATGTTTCATTAACACAATCACTAACAAATAACACCAGTATTGTTATAGCTCAACTATCAGATTTAGCAAATCTTGTTCTGATGCTAAACACCACCAAAACTGTCATCTGGGAGAGCTTTGATCATCCAACAGACACCATGCTTTCATATCAAAGGGTTGGTTTTGATAGAAAATCTAATCAAAGCTGGTTCCTTCAATCCTGGAAGACAGATGATGACCCTGGAAAAGGTGCATATACTTTAAAATTCAGCACCAATGGTAAACCTCAGTTGTTTATATACAATCGGAACAACCCTTGGTGGCGCGGTGGCCCTTGGAATGGAGAACTATTAGCAGGTGTACCAAATCTGAAACGAGATATGGCCCTTTTTAACGTTACTTTGGTTGAAGATGACAACTATTTAGCACTCACATATAACATGCTTGACGAGTCTGTCATTACTAGGATAGTGCTTGAGAAATCTGGTATCCTTCAATCATTCACGTGGGACAGTCAAAAGAGTCAATGGAGCCGGTACTTGTATGAACCAACAAACCAATGTGATAACTACAAAACATGTGGATCAAATAGTAATTGCAACCCTTTGAACTATGACAACTTTAAGTGTACATGTTTACTTGGTTTTGAACCCAAATTTCCACGTGATTGGTATGACACTAGAGACGGGTCAGGAGGTTGTGTGAGGAAGAAAGGCGTATCTGTTTGTGGGAATGGAGAAGGGTTTGTCAAAGTTGTAAGCTTGAAGGTTCCTGATACATCTGTGGCAGTTGCTAAAGGTGGTTTAAGTTTGGAAGAATGTGAGAAAGAATGCTTGAGAAACTGCTCTTGTACGGCCTATGCAGCCGTTGATGTGAGAAATGGTGGAAGTGGGTGTTTGGCATGGTATGGGGATTTAATGGACATTCAGAAACTCAGTGATCAAGGCCAAGATTTGTTTTTACGGGTCGATAAAGTTGAACTAGCAAATTACTACACAAAAAGCAAAGGTACCCTTGATAAAAAGAGGATGGCTGCAATTCTTGTAGCTTCTATTGTTGCAATTGTTCTCCTCCTCTCCTGTGTATTTTGCAGGTGGAAGAAAAAAAGAAAGGATAAAATGATGCGGCATCTAAGCCAAGATTTCTCTGGAGAAGAGAATGATGCTCAAAGCAACACACATCCAAATCTACCGTTTTTCAATTTTAAAACGATTATGAAAGCTACTGGAAATTGTGGTCATGAGAATAAACTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTGAAAAGATTATCCAAAGATTCAGGTCAAGGCAAAGAAGAATTTAAAAATGAAGTTACACTTTTAGTTAAACTCCAACACAGAAATCTAGTGAGATTGCTAGGTTGTTGCTTTGAAAAAGAAGAAAGGATGCTAGTTTACGAATACCTACCAAACAAAAGTCTAGACTTCTTTATATTCGATCTAAACCAAAGGTCGTCATTGGATTGGGGTAAGCGTTTTGAAATCATTTGTGGGATTGCTCGGGGTGTTTTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAGGCTAGCAATGTTCTCCTTGATGCTGCAATGAATCCCAAAATATCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATCCAAGCAAGAACAAAAAGATTGGTTGGAACATACGGATATATGGCACCAGAATATGCAATGGAAGGACTATATTCAACAAAATCTGATGTCTTCAGTTATGGGGTCTTGCTACTAGAAATTATTGCTGGACAAAGAAACTCACATTGTGAAAAAGAAAGATCCTCCCCAAATTTAATTGGACATGTGTGGACACTATGCACAGAGGGGAGAGCTTTGGATATAGTTGATCCAACATTAAACGGGTTTTATCCCTCTGCTATAGTTCTAAGATGCATTAAAATTGGACTCTTGTGTGTGCAAGAAAATGCCATGAATAGACCATCCATGTTGGAAGTTGTTTTCATGCTATCCAATGAAACACCTCTCATCTCACCTCAAAAACCAGCATTTTTTTTCAATGGCAAGCAAGATTTGCAAGAGTCTTCAACATCAGGAGGAG 2503 0.3855 MDSAKNLLYLVITQNHRYNNLQLNCLIIFLFIFSFCSCSTDTISIHKPITDGGDLLVSKSKTFALGFFTPGKSTSRYVGIWYYNLPNQTVWVANRDTPINDTSGILSIDPSGNLVLHHNLSTIPIWSTDVSLTQSLTNNTSIVIAQLSDLANLVLMLNTTKTVIWESFDHPTDTMLSYQRVGFDRKSNQSWFLQSWKTDDDPGKGAYTLKFSTNGKPQLFIYNRNNPWWRGGPWNGELLAGVPNLKRDMALFNVTLVEDDNYLALTYNMLDESVITRIVLEKSGILQSFTWDSQKSQWSRYLYEPTNQCDNYKTCGSNSNCNPLNYDNFKCTCLLGFEPKFPRDWYDTRDGSGGCVRKKGVSVCGNGEGFVKVVSLKVPDTSVAVAKGGLSLEECEKECLRNCSCTAYAAVDVRNGGSGCLAWYGDLMDIQKLSDQGQDLFLRVDKVELANYYTKSKGTLDKKRMAAILVASIVAIVLLLSCVFCRWKKKRKDKMMRHLSQDFSGEENDAQSNTHPNLPFFNFKTIMKATGNCGHENKLGQGGFGSVYKGCLVNGQEIAVKRLSKDSGQGKEEFKNEVTLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDLNQRSSLDWGKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDEIQARTKRLVGTYGYMAPEYAMEGLYSTKSDVFSYGVLLLEIIAGQRNSHCEKERSSPNLIGHVWTLCTEGRALDIVDPTLNGFYPSAIVLRCIKIGLLCVQENAMNRPSMLEVVFMLSNETPLISPQKPAFFFNGKQDLQESSTSGG 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2462 834 SMART blect_4 47 171 IPR001480 -
Psa7g2462 834 PIRSF SRK 13 834 IPR024171 GO:0004674
Psa7g2462 834 SMART ntp_6 365 444 IPR003609 -
Psa7g2462 834 Gene3D - 34 169 IPR036426 -
Psa7g2462 834 Gene3D Phosphorylase Kinase; domain 1 507 608 - -
Psa7g2462 834 CDD STKc_IRAK 539 804 - -
Psa7g2462 834 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
Psa7g2462 834 Gene3D Hepatocyte Growth Factor 362 442 - -
Psa7g2462 834 Pfam Protein tyrosine and serine/threonine kinase 536 799 IPR001245 GO:0004672|GO:0006468
Psa7g2462 834 SUPERFAMILY Protein kinase-like (PK-like) 514 819 IPR011009 -
Psa7g2462 834 SMART serkin_6 536 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2462 834 Pfam D-mannose binding lectin 89 197 IPR001480 -
Psa7g2462 834 Gene3D Transferase(Phosphotransferase) domain 1 609 812 - -
Psa7g2462 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Psa7g2462 834 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 25 828 - -
Psa7g2462 834 CDD PAN_AP_plant 365 444 - -
Psa7g2462 834 CDD B_lectin 56 171 IPR001480 -
Psa7g2462 834 ProSiteProfiles Protein kinase domain profile. 533 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2462 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 202 IPR036426 -
Psa7g2462 834 PANTHER - 25 828 - -
Psa7g2462 834 ProSiteProfiles EGF-like domain profile. 305 343 IPR000742 -
Psa7g2462 834 ProSiteProfiles PAN/Apple domain profile. 364 445 IPR003609 -
Psa7g2462 834 ProSiteProfiles Bulb-type lectin domain profile. 40 168 IPR001480 -
Psa7g2462 834 Pfam PAN-like domain 364 430 IPR003609 -
Psa7g2462 834 Pfam S-locus glycoprotein domain 229 341 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2462 Psa-Chr7 174051537 174066046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2462 465 824 Receptor kinase-like Gene Family AT4G23190 51.648 1.46e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa7g2462 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2462 - - mtr:MTR_4g091840 1360.13