Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2460 ATGAAAGAGCTTCTTCTCAGTCAATTTCTTCTTCTGTTGATGCTTTATTACCCTTCTTGCCACTCACTTGATACAATTACGCTAAACCAAACTATCAAAGACGGCGACGTTTTGGTCTCCAGCCCACGAGGAACCTTCGCCCTTGGTTTCTTCAGCCTAAAACCAGATTCCAAAACCCGTTACCTGGGTATATGGTACAACAAAATTTCGGAGCAAACCATTGTTTGGGTTGCAAACAGAGACACTCCTCTCAGTGACAGTTCCGGTGTTCTCTCCATCAATAACGGCAACCTCGTACTCCACGACCTCAACAAAAACAAAAACGTTAAACCCATTTGGTCTTCCAATTTTTCAACTTCTACCTCGTTTAGTGGCTCTTCAGCTAAGCTTTTGGATACAGGAAACTTTGTTTTGACTCATGATAACGAAAAGAATATTTTGTGGCAGAGTTTTGATTTTCCATCTAACACTTTACTTCCTTTCATGAAACTCGGGTTGGACCGTAAAACCGGTCTGAACCGGTTCCTCAGATCTTGGAAATCCCCGAATGACCCCGGAACTGGAAATTTCACATACCGGATTGACCCGACCGGTTTTCCTCAATTGTTTCTGTATAGAAATAAATCTCCAACATGGAGAGTCGGGTCGTGGACGGGTCAGAGATGGAGCGGAGTACCCGAAATGACTCCGAATTTCATCTTCAACGTTAGCTACACGAACAACGAAGATGAAGTTTATGTAGTATACGGTGTGAAGGATCCAATGGTGTTATCGAGAATGGTTTTGGAAGAAACGGGTCACGTGAGGAGGCTGACGTGGCAACCTAGCGAACGTAGATGGTTTCAGATTTGGTATGGTCCGAAAGAGGAATGTGATGGTTTCAAACAGTGCGGGTCGAACTCGAATTGTAACCCGTATAATTCGGATAAGTTTGAGTGTGAGTGTTTACCCGGTTATGAACCGAAGTTTGCGAGGGAATGGTATTTGAGAGACGGGTCGGGTGGGTGTGTGAGAAAGAGGAATGTTTCCACGTGTGGAAGTGGGGAAGGGTTTGTGAAAGTGGCACGTGTGAAAGTTCCTGATACTTCAAAGACACGTGTGAATGAGAGTTTGGGTTTGAAAGAGTGTAGAGAGAAGTGTTTGGAGGATTGTTCTTGTGTTGCCTATGCAAGTGAAAATGAGATATCTGAGAGTGGGTGTGTTACTTGGCATGGTGACATGGAAGATACAAGAACTTACACACAAGTTGGACAAGATTTGTATCTACGTGTGGATGCACATGAATTAGCTATGCATGCAAAGCATCCATATGGTTCTCTTGGCAAAAAAAGGATGGTGGTGGTATTAGTCATTTCTTCTTGCTTGGTATTGTTGATGGGGATCATTTTCGTGTACTGGTTTGTGAAATCCAGGAAACAATGGTCGAAAAGGGATCCCAAGTATTCATTTCGTCTTAGCTTTGACGACTCTTCTAATCAGCAAGAATTTGATAGTACAAACAATTCAAATTTACCATTCTTTGATCTTAGCTCCATAGCTGCTGCAACGGATAATTTTTCACTTGATAACAAGCTTGGTGAAGGTGGTTTTGGTTCTGTTTATAAGGGTATATTGAGCAATGGAATGGCAATTGCAGTGAAGAGACTGTCGAAGTATTCTGGACAAGGCATAAAAGAGTTTAAAAATGAGGTTGTTTTGATTTCAAAACTCCAACACAGAAATCTTGTGAGGATCTTAGGTTGCTGCATTCAAGGAGAAGAAAAGATGTTAATCTATGAGTATCTGCCTAACAAAAGCTTAGACTTTTTCATTTTTGATAAATCTAAAAGCTCAGAGCTAGATTGGAGAAAGCGGTTTGATATTATCTGTGGCATTGCTAGAGGGATATTATATCTTCATCATGACTCGCGATTAAGAATAATTCATAGAGACCTAAAGGCCAGCAATGTCTTGTTGGATTCTGCATTGAACCCAAAAATTGCAGATTTTGGTATGGCGAGAATGTTTGGTGGAGATCAAATTGAAGCAGTTACGAATCGTGTTGTTGGAACTTATGGTTATATGTCTCCAGAATATGCCATGGAAGGACAATTTTCAGTGAAGTCTGATGTATATAGCTTTGGAGTTTTACTGCTAGAGATTATTACAGGAAAGAAGAACAGTGGTCAATATGAAGACAATGCATCCACAACATTAGTTGGACATATATGGGATCTATGGAGAGAAGACAAAGCCATGGAGATTGTTGATCAATCATTAGGAGAGTCGTTCTCCGAGTTTGAATTTCAAAGATGCATCCAAATTGGGCTTTTATGTGTACAAGATTATGCTGTTGACAGACCATCTATGTCAGCTGTTGTATCTATGTTGGGAAATGACTCAACTCTTCCTACTCCAAAACAACCGGCATTTATTTTCAAGAAAAGTAACTATGAGAGTTCAAATCCATCAACCAGTGGAGGAATTTACTCAGTAAATGATGTAAGTATGACTATGATTGAAGCTCGCTAA 2511 0.4066 MKELLLSQFLLLLMLYYPSCHSLDTITLNQTIKDGDVLVSSPRGTFALGFFSLKPDSKTRYLGIWYNKISEQTIVWVANRDTPLSDSSGVLSINNGNLVLHDLNKNKNVKPIWSSNFSTSTSFSGSSAKLLDTGNFVLTHDNEKNILWQSFDFPSNTLLPFMKLGLDRKTGLNRFLRSWKSPNDPGTGNFTYRIDPTGFPQLFLYRNKSPTWRVGSWTGQRWSGVPEMTPNFIFNVSYTNNEDEVYVVYGVKDPMVLSRMVLEETGHVRRLTWQPSERRWFQIWYGPKEECDGFKQCGSNSNCNPYNSDKFECECLPGYEPKFAREWYLRDGSGGCVRKRNVSTCGSGEGFVKVARVKVPDTSKTRVNESLGLKECREKCLEDCSCVAYASENEISESGCVTWHGDMEDTRTYTQVGQDLYLRVDAHELAMHAKHPYGSLGKKRMVVVLVISSCLVLLMGIIFVYWFVKSRKQWSKRDPKYSFRLSFDDSSNQQEFDSTNNSNLPFFDLSSIAAATDNFSLDNKLGEGGFGSVYKGILSNGMAIAVKRLSKYSGQGIKEFKNEVVLISKLQHRNLVRILGCCIQGEEKMLIYEYLPNKSLDFFIFDKSKSSELDWRKRFDIICGIARGILYLHHDSRLRIIHRDLKASNVLLDSALNPKIADFGMARMFGGDQIEAVTNRVVGTYGYMSPEYAMEGQFSVKSDVYSFGVLLLEIITGKKNSGQYEDNASTTLVGHIWDLWREDKAMEIVDQSLGESFSEFEFQRCIQIGLLCVQDYAVDRPSMSAVVSMLGNDSTLPTPKQPAFIFKKSNYESSNPSTSGGIYSVNDVSMTMIEAR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2460 836 Gene3D Transferase(Phosphotransferase) domain 1 595 800 - -
Psa7g2460 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Psa7g2460 836 Pfam Domain of unknown function (DUF3403) 792 836 IPR021820 GO:0004674
Psa7g2460 836 Gene3D Phosphorylase Kinase; domain 1 482 594 - -
Psa7g2460 836 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Psa7g2460 836 SMART serkin_6 519 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2460 836 CDD STKc_IRAK 525 790 - -
Psa7g2460 836 ProSiteProfiles Bulb-type lectin domain profile. 23 151 IPR001480 -
Psa7g2460 836 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 46 832 - -
Psa7g2460 836 ProSiteProfiles PAN/Apple domain profile. 345 425 IPR003609 -
Psa7g2460 836 Pfam D-mannose binding lectin 73 180 IPR001480 -
Psa7g2460 836 CDD B_lectin 29 154 IPR001480 -
Psa7g2460 836 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544
Psa7g2460 836 Pfam Protein tyrosine and serine/threonine kinase 520 789 IPR001245 GO:0004672|GO:0006468
Psa7g2460 836 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Psa7g2460 836 SUPERFAMILY Protein kinase-like (PK-like) 496 790 IPR011009 -
Psa7g2460 836 Pfam PAN-like domain 345 409 IPR003609 -
Psa7g2460 836 CDD PAN_AP_plant 343 424 - -
Psa7g2460 836 Gene3D - 20 151 IPR036426 -
Psa7g2460 836 SMART blect_4 29 154 IPR001480 -
Psa7g2460 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 46 832 - -
Psa7g2460 836 ProSiteProfiles Protein kinase domain profile. 519 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2460 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Psa7g2460 836 SMART ntp_6 346 424 IPR003609 -
Psa7g2460 836 PIRSF SRK 1 836 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2460 Psa-Chr7 174035410 174040491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2460 490 836 Receptor kinase-like Gene Family AT4G11530 56.780 3.64e-130 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa7g2460 PK_Tyr_Ser-Thr 8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2460 - - gmx:100812814 1325.07