Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2445 ATGTATAATGGAGCCGACTCTCTAGTTATTTTGTTGGCAGAATTTGAAGCGTCATCAAAGCAATTGATATCTGATCTCACAAGTAGCTTACAAAAGAACTTGCCCACACTTGGATGTCCAAGTGGTGTTGAAATACAATTTTGGACTCATGAATGGGAGAAACATGGAACTTGTTCTGAATCAAGCCTTAAACAACATGATTATTTTGAAACAACGGTCAACTTGAAACAAAAAGCCAATCTCATCGATGCTCTTACTAGTGAAGCTGCTGGAAATTCATACAACCTGAGCAGTATCAAAGAAGCTATAGAAAAGGGAGTTGGGTTTACTTCATTCATTGAATGCAATGTGGATTCATCTGATAACAGACAACTATACCAAGTTTATTTGTGTGTGGATACTTCCGGATCTAACTTCATTCAATGTCCTGTTTTCCTCCATGGAAAATGTGGATCTGAGATTGAAGCTGGTCCCTTTGCCAAAAAGGATTGGTATGATATCAAAGCTCCTTCAGTTTTCCAAGTGAAGAATGTTGGCAAAACCCTTATTTCTCGTACTCAGAGAACTAAGGACGGAGAAGCTTATGCTTACTTGATTCAAGTATCGTAG 609 0.3826 MYNGADSLVILLAEFEASSKQLISDLTSSLQKNLPTLGCPSGVEIQFWTHEWEKHGTCSESSLKQHDYFETTVNLKQKANLIDALTSEAAGNSYNLSSIKEAIEKGVGFTSFIECNVDSSDNRQLYQVYLCVDTSGSNFIQCPVFLHGKCGSEIEAGPFAKKDWYDIKAPSVFQVKNVGKTLISRTQRTKDGEAYAYLIQVS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2445 202 PANTHER RIBONUCLEASE T2 21 156 IPR001568 GO:0003723|GO:0033897
Psa7g2445 202 Gene3D - 13 167 IPR036430 GO:0003723|GO:0033897
Psa7g2445 202 SUPERFAMILY Ribonuclease Rh-like 20 156 IPR036430 GO:0003723|GO:0033897
Psa7g2445 202 ProSitePatterns Ribonuclease T2 family histidine active site 2. 47 58 IPR033130 -
Psa7g2445 202 PANTHER BNAA02G26660D PROTEIN 21 156 - -
Psa7g2445 202 Pfam Ribonuclease T2 family 20 142 IPR001568 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2445 Psa-Chr7 173171561 173173183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2445 158 190 Cytoplasmic Ribosomal Protein Gene Family AT3G04840 75.758 9.90e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2445 K01166 - gmx:100305644 206.838