Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2429 ATGGATAGGGATCTATTGATATTGATAATAGGAATATGCATAGGCTTCGTAATTGGAGCTGGTTTGGGATTTTTAATTTTAGTCCTCTTCATGTGTGGAAGGAAGTTTGTAGAGGGGGAAAAGAGCAGTCCTCGGAGGACCCAGGCCGTTACTGGTCATGTCAAAAGGGTTGATTCCAGCATATCATTATCAGACTCCAATGCAGCTTTGGAGTCACCAAGAACATCGGAATGGAGTAACGCAAATTTTTGGTTAGAAGGACTAAGGAGGAAGAATTCAGTCTCAGCATGTGGAATTCCTAAGTATTCTTACAAAGATGTAGAAAAGGCTACTTCTAATTTTACAACGATCATTGGCCATGGAGCATTTGGTTCTGTTTACAAAGCACAAATGCCTACAGGTGAGACGGTTGCAGTTAAAGTTCTTGGTGCTAATTCAAGACAAGGAGAACAAGAATTTTTAACTGAGGTTCTATTACTTGGAAGATTACATCACAAAAACCTTGTGGCTTTGGTGGGATATGCTGCGGAAAGAGGACGACATATGCTCCTTTACATTTACATGAGCAATGGCAGTCTTGCTTCTCATTTATATGGAAAAGATTATGAGCCATTAAGCTGGGATTTGAGACTTAGCATAGCACTAGATGTTGCAAGGGTGCTGGAATATCTACATTATGGGGCTGATCCACCTATTGTGCACCGTGACATCAAGTCTTCCAACATTCTATTGGATGAGTTTATGAAAGCCAAGGTCACTGACTTTGGGCTTTCCAGACCAGAGATGATTAAGCCGCGTGCGTCCAATATCAGAGGAACTTTTGGATATCTTGTAGGACTCATATATAGATGTTCATGGAAGTGA 864 0.4097 MDRDLLILIIGICIGFVIGAGLGFLILVLFMCGRKFVEGEKSSPRRTQAVTGHVKRVDSSISLSDSNAALESPRTSEWSNANFWLEGLRRKNSVSACGIPKYSYKDVEKATSNFTTIIGHGAFGSVYKAQMPTGETVAVKVLGANSRQGEQEFLTEVLLLGRLHHKNLVALVGYAAERGRHMLLYIYMSNGSLASHLYGKDYEPLSWDLRLSIALDVARVLEYLHYGADPPIVHRDIKSSNILLDEFMKAKVTDFGLSRPEMIKPRASNIRGTFGYLVGLIYRCSWK* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2429 287 Pfam Protein tyrosine and serine/threonine kinase 114 262 IPR001245 GO:0004672|GO:0006468
Psa7g2429 287 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Psa7g2429 287 Gene3D Phosphorylase Kinase; domain 1 76 187 - -
Psa7g2429 287 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 8 277 - -
Psa7g2429 287 PANTHER OS01G0253100 PROTEIN 8 277 IPR045271 GO:0004714|GO:0006468
Psa7g2429 287 Gene3D Transferase(Phosphotransferase) domain 1 188 278 - -
Psa7g2429 287 ProSiteProfiles Protein kinase domain profile. 112 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2429 287 SMART serkin_6 112 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2429 287 SUPERFAMILY Protein kinase-like (PK-like) 97 277 IPR011009 -
Psa7g2429 287 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2429 Psa-Chr7 171807843 171810581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2429 98 277 Receptor kinase-like Gene Family AT3G19300 50.270 2.03e-58 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Psa7g2429 PK_Tyr_Ser-Thr 8.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2429 - - lang:109332283 408.683