Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2409 ATGTTAACACTTAACACTGTATTTCGTCTAAGCAAACTCGAGCATTTTGCAAACAACTTTGATTCCATAATCTCTTCTTTGCTGGCGAAGAACAGAAAAAATAAGAACCTTCAACGTAAGAAAACAGGAAAGAAACGTAAATTACCTGATCATAACTCTAAACAGAAACTAAAGAAAGTCTGCAAAAAAGACCAAATATTGCCTGTTGGGTTGCTAGAGAAAAGAATACAGATCAATAAAGTTGGAAGATTGAGTTATAGAATAAACTATACAAAAATCTGTCATGCAACAAAAGACTTTAGTAGGGACAATGTGATTGGGGTAGGAGTGATTGGAATAATGTACAAGGCAACACTTCCCAACGGTTGTTTCTTGGCAGTTACGAGACTAAATGATTCACAGTTATCTATCAAAAGGTTCGAGTTGGAAATAATGTTATCGGGACAATACAGTCACAGAAACATAGTTCCGTTGGTTGGTTTCTGCATAGAAGAACAAAATGAAAGAGTTTTGGTGTATCAGTACATGCCAAATGGAAAACTTTCTGATTGGTTGAATGATGATACTACAAAACTAGGATGGTCAAGAGTTATCAAAATTGCACTTGGTGTTGCAAGAGGTTTATGTTGCTTCCATCATAGCTTGCATATGGTTCATCTTAGCATAAGTTCCGAGTGTATCTTGTTAGGGAACAATTTTGAGCCAAAAATATCCAATGTTGGAGAGGCTATTATGAATAATGATGTGAACAAAAACATAGGATTTGAGAAGAAAGATGTTTATGACTTTGGTTGTTTGCTTTTTGAGTTGATTAAGGGGAAGAAATTTGGCCAAGTGAGTGATTGTTTAAGCGATACAAGTGTTCCTTTTACGACGTACACGTATCCGAATCCTATGAACCTGTTGGAGGATCATTTTGGGTTCTATGATGTAATGGATGAAACTTTAAACAAGATAGAATTTGAAGATGAGGTGTCTTCTCTTCTTAGTGTTGCATGTGATTGTGTCCATCCTTTCTTTGAACAAAGACCTACTATGCTTGAGGTGTATTGCAAGATGGGAAAGATATGGGAGAGAGATGAGATTTGTGAAGATCTTGATATTGTTACTTCTACTACAAGTAACGTCACCAATAGTTTTGGTTGTGAGTGA 1152 0.3585 MLTLNTVFRLSKLEHFANNFDSIISSLLAKNRKNKNLQRKKTGKKRKLPDHNSKQKLKKVCKKDQILPVGLLEKRIQINKVGRLSYRINYTKICHATKDFSRDNVIGVGVIGIMYKATLPNGCFLAVTRLNDSQLSIKRFELEIMLSGQYSHRNIVPLVGFCIEEQNERVLVYQYMPNGKLSDWLNDDTTKLGWSRVIKIALGVARGLCCFHHSLHMVHLSISSECILLGNNFEPKISNVGEAIMNNDVNKNIGFEKKDVYDFGCLLFELIKGKKFGQVSDCLSDTSVPFTTYTYPNPMNLLEDHFGFYDVMDETLNKIEFEDEVSSLLSVACDCVHPFFEQRPTMLEVYCKMGKIWERDEICEDLDIVTSTTSNVTNSFGCE* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2409 383 Gene3D Phosphorylase Kinase; domain 1 68 175 - -
Psa7g2409 383 PANTHER RECEPTOR-LIKE PROTEIN 55 35 359 - -
Psa7g2409 383 SUPERFAMILY Protein kinase-like (PK-like) 84 350 IPR011009 -
Psa7g2409 383 Gene3D Transferase(Phosphotransferase) domain 1 251 362 - -
Psa7g2409 383 ProSiteProfiles Protein kinase domain profile. 100 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2409 383 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 35 359 - -
Psa7g2409 383 Gene3D Transferase(Phosphotransferase) domain 1 176 250 - -
Psa7g2409 383 MobiDBLite consensus disorder prediction 34 53 - -
Psa7g2409 383 Pfam Protein tyrosine and serine/threonine kinase 103 350 IPR001245 GO:0004672|GO:0006468
Psa7g2409 383 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2409 Psa-Chr7 170479645 170481496 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2409 80 349 Receptor kinase-like Gene Family AT5G45780 33.775 1.16e-35 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa7g2409 PK_Tyr_Ser-Thr 1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2409 - - mtr:MTR_5g057660 409.838