Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2395 ATGTTTACATTAATATTTTTTGATTCCAAGGTTAGTTTTCTCATGGAGAATATTTCATTCATCAGAGGGTTTCCTGATCAGGAAATAATGGAGGATCCTTCTCTCTATCTGCATCAATGGCATTTAAACTCTATGGACGAGTCTAACACACTGCCGATAGCTTCTGCTTTTGGAGACACTTTGCAACACCATTCATATATTTATCCAAACTTCAACCTCAGAGCTTCGGTTGAAACTGATCAGAGACCCGAGACTCAATTTGTTTCGTACCAGAACCTTCTTTCGTACGTTGATTCAAATCATTTTAATCAGTTGAATTTAGTGAAGCCTAAGGATGAGATGGTTTGTCCTCAAAACAGTAACACAACTTCTGACGCAGTCTCTCAAGGAATCATGGAGGCTCAAAGGATATCGACACGTCATAAAGTCTCTCTACCTCAGGACCATATAATAGCTGAAAGAAAGCGTCGAGAGAAGCTCAGCCAGCGCTTCATTGCTCTTTCTGCCCTTGTTCCCGGACTACAAAAGATGGACAAAGTTACCGTTCTTGGAGATGCTATCAAGTACTTGAAGAAACTGCAAGAGAAGGTGAAGGCTCTTGAGGAGGAACGGAACATGAAGAAAAACGTGGAATATGTGGTGGTTGTGAAGAAATCTCAACTATCGAATGACGTTGAAAAATCTTCTGCAGAACCTGGCAGTCCCTTCGACGAGGAACTGCCAGAAATTGAAGCAAGGTTTTGCGATAGAAATGTACTCATAAGAATTCACTGTGAGAAAAGCAAAGGAGCTGTGGAAAAAACAATCCATGAAATTGAGAAACTTCATCTAAAAGTCATCAATAGCTGTGTCATGGCATTTGGGAGCTGTGCACTTGATATAACAGTTATTGCTCAGATGGATATAGAATTCTGCATGACAGTGAAGGAACTTGTGACAAACCTGCGCTCAGCTTTTGCATCGTTCATCTGA 972 0.4074 MFTLIFFDSKVSFLMENISFIRGFPDQEIMEDPSLYLHQWHLNSMDESNTLPIASAFGDTLQHHSYIYPNFNLRASVETDQRPETQFVSYQNLLSYVDSNHFNQLNLVKPKDEMVCPQNSNTTSDAVSQGIMEAQRISTRHKVSLPQDHIIAERKRREKLSQRFIALSALVPGLQKMDKVTVLGDAIKYLKKLQEKVKALEEERNMKKNVEYVVVVKKSQLSNDVEKSSAEPGSPFDEELPEIEARFCDRNVLIRIHCEKSKGAVEKTIHEIEKLHLKVINSCVMAFGSCALDITVIAQMDIEFCMTVKELVTNLRSAFASFI* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2395 323 Coils Coil 183 210 - -
Psa7g2395 323 PANTHER BHLH TRANSCRIPTION FACTOR 17 322 - -
Psa7g2395 323 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Psa7g2395 323 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 220 IPR036638 GO:0046983
Psa7g2395 323 CDD bHLH_AtNAI1_like 144 218 - -
Psa7g2395 323 Pfam Helix-loop-helix DNA-binding domain 148 194 IPR011598 GO:0046983
Psa7g2395 323 PANTHER SYMBIOTIC AMMONIUM TRANSPORTER 17 322 - -
Psa7g2395 323 SMART finulus 150 199 IPR011598 GO:0046983
Psa7g2395 323 Gene3D - 146 217 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2395 Psa-Chr7 170030339 170032444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2395 129 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 53.769 1.08e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Psa7g2395 HLH 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2395 - - vun:114179595 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2395 7 170030339 170032444 Psa1g4859 1 362246244 362248404 PCT