Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2392 ATGGAGACCTATCAATATCCTCCCTCATATCCAGATTCCGGCCACTCATCACCACGTTCAAGAGATATCGATTTCGACAATCAAGCCTCATGGGAAGACCAGCAGAACTACAAAGCCAAGTTCATGTGCAGCTACGGCGGAAAGATCCAACCACGGAGCCACGACAACCAACTTTCTTATATCGGCGGTGACACCAAAATATTAGCCGTCGACCGAAACATCAAGTTTCAAGCCTTCCTCTCCAAGCTCTCCACTCTCTGCGACGCTATTCCACAAGAGATAAGTTTCAAGTACCAGCTTCCTGGTGAAGAACTCGATGCTCTTATCTCTGTCACAACAGAAGACGACCTCGAACACCTCATGCATGAGTACGATCGCCTCTATCGTCCTTCCTCAAAACCCGTCCGAATGAGGCTCTTCATATTCATCACACCAAATTCGGGTTCGATTTCTCAACCCGATCTACTTAAACCTCAATCCAACGCTGATTTCCTCTTTGGTCTTGATAACAAAACCCTAGCTCCACCGGTTCAACCTCCTTCCTATGCCGCTGTCAAGTATCATGAGCCTGTGCCAGATCTTGTTGCGCAGCAACCTGAGTATTCGCCACGTGGACCCGCGGATGATAGTGTCGAGATTCAGAGGCAGTTACAGCGCTTGCAGGTTTCTGAGAGTGAGCAGTCCCTGTATCGGAGAAGTGTAGATGGATTCACCGGAGGATATGCCGCTGCTACCACTCCCGGAGGCGATTATTACTTGCAGAAGATGCCGGAGAAAGCTGCTCCTTCGAATTCGCCAACTGCTGTTCATCAACCGGCGGGTTACTGGCCGGAAAAGCAATTTTCCAGCGACGGTTTTCCGATTACGGGGATGAACACCTCCGGTGGAGGAGACCAGCATGTTTACATGATGCCGACACCGGGAACATTCTACCACGCGCCTCAGGTGATGCGTCCACCGGCGGCGCAGGTGACCCAGGGGTACTACGCTGTGCAGCGAATGTCTTCTGATGGATACCGGGAACAGCCGGTGTACGGTGGCGTTCAACCTCAGAATGTGACGTTTTCGTCTGCGGGTCAGGGGAATCTAGCACCGGCTCAGCAAGTCAAACCTTCGGCTTATGCGGAAGGATATGGCTTAGTTAGGCCAGCTGGCGTAGCGGATAATGCGGGGGCTGCTGGGTATGCGCAAGTGGCGTATGATAGTGCAAGTGGGAGACATGTTTACTATACTGCGCCTGGAGGGATGGTCCATGCGCCGCAGTATCAAGGGGTTACTCCGGTTTTCAGCAATGACATGAGACCGGCTGCGGTTCCTGTGGGCCAGGATCCTAAAGGTGTAAACAAGGGCCCACAAGGATAA 1362 0.5213 METYQYPPSYPDSGHSSPRSRDIDFDNQASWEDQQNYKAKFMCSYGGKIQPRSHDNQLSYIGGDTKILAVDRNIKFQAFLSKLSTLCDAIPQEISFKYQLPGEELDALISVTTEDDLEHLMHEYDRLYRPSSKPVRMRLFIFITPNSGSISQPDLLKPQSNADFLFGLDNKTLAPPVQPPSYAAVKYHEPVPDLVAQQPEYSPRGPADDSVEIQRQLQRLQVSESEQSLYRRSVDGFTGGYAAATTPGGDYYLQKMPEKAAPSNSPTAVHQPAGYWPEKQFSSDGFPITGMNTSGGGDQHVYMMPTPGTFYHAPQVMRPPAAQVTQGYYAVQRMSSDGYREQPVYGGVQPQNVTFSSAGQGNLAPAQQVKPSAYAEGYGLVRPAGVADNAGAAGYAQVAYDSASGRHVYYTAPGGMVHAPQYQGVTPVFSNDMRPAAVPVGQDPKGVNKGPQG* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2392 453 Pfam PB1 domain 54 141 IPR000270 GO:0005515
Psa7g2392 453 MobiDBLite consensus disorder prediction 1 16 - -
Psa7g2392 453 CDD PB1_UP2 42 142 - -
Psa7g2392 453 PANTHER OS05G0427100 PROTEIN-RELATED 1 445 - -
Psa7g2392 453 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 445 - -
Psa7g2392 453 MobiDBLite consensus disorder prediction 1 22 - -
Psa7g2392 453 SMART PB1_new 53 144 IPR000270 GO:0005515
Psa7g2392 453 Gene3D - 59 143 - -
Psa7g2392 453 SUPERFAMILY CAD & PB1 domains 54 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2392 Psa-Chr7 169879795 169881156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2392 37 145 MAP Kinase Kinase Kinase AT5G57610 42.202 1.95e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2392 - - adu:107480527 550.821