Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2345 ATGTTACATATGGCTTTTTCATGCTTTCTTAAACTATCTTTCAAATTCCTTCATCATTTCGCATGGCCTCTTGTTGCTCTGGTGTATCCTATGTGTGCTTCCATTCAAGCAATCGAGACTGATTCTTATGCAGAAACTAAGAATTTGATCTCATATTGGATACTTCTTTCATTCATTTATCTCTTTGAGTATGCTTTTATCACCCTTCTACCATGGTTGTGGGTCTGGCTGTACGTTAAGCTAATGATCATCTTCCTGCTCACCATACCGGACTTTGGACGAGCTACTTATGTTTATAATAACCTTATCCGCCCCATGAAATTGCAAATAGTCGTCGCATGGAGGTTTAATGAGTACTGGAGGAAGTGTTTTGTTGAGAAAGATGACTTTTTAATGCATGCAGAGAGATATGTGAAAGAAAATGGAACTGAAGCCTTAGAGAAACTCATTGCTAGTAAGAACACAATGTGTAGGCCTGATGCAGAAGTGACAAACGAAATCATATCTACTGATAATAAAGAAATGCTAAAGACAAATGGTGAACGACTCCAAACTGAGCACCTAGACATCAAAGATTTGGAGGCTATTGAAAAAAGAGAAACTCCTGCCACCAAGCAAGATATTCCTGTCATACCTAAAGTTGGGCCAAGTCAAAGTGCATCATCAGCCACAACCAAAGGAACAGCGGAGAATGACAGAGCTGGTGGAGAGGTTCCTCAGAGTTCTACTTCTACACAGAAGGAAATGCAGAAAGAGTGGACTTGTGCTTTATGTTTGGTAACAACATCGAGCGAGATGACCTTGAACTCCCACCTCAGTGGAAGGAGACACAGGGCTAGAACTGAAGCTTTAATAGCAAAGAAGCAACCTACTCTTCAGAGACAAAAGGACGCAGTGACAAATGAAATCTTAGCTACGGATGATAAAGAAATGCTAAAGACAAATGGAGATCAAAGACTCCAAACAGAACATAGAGACATCAAAGAGAAAAAAGAAATCCCTGCAACCAAGCAAAGAACCTATGATAATACTGTGGCAAGTCAAAAGGCATCATCAGACATAGTAGAAACCAAAGCAACAGCAGAGAGTGACAGAGCTGGTGGAGAGATTCCTCAAAGTTCTTCAAGACTGAAGGAAGTGCAGAAAGAGTGGACTTGTGCTTTATGTTTGGTAACAACATCGAGCGAGGCAACTTTGTTTTCCCACCTCAAAGGGAAGAAACACATGGCTAGTTGTGAAGCAGCTTTGAAAGCGAAGAAGCAAGCTGCTCTGCAGAAGCTGAAAATCTATCAGCCCAAAGAGGAGGTGAAACAGAAGAATGTTAACAATATGTTAAATTCGAAGGTCAAGAATGGAGATGGTAATGTTAACAAAGAAGAGGAGGTGAAACAGAAGAATGTTAACAATGTGTTAAATTCCAAGGTCAAGAATGGAGATGGTATTGTTAACAAAGTGTTGAAGAGTCTGTAA 1470 0.402 MLHMAFSCFLKLSFKFLHHFAWPLVALVYPMCASIQAIETDSYAETKNLISYWILLSFIYLFEYAFITLLPWLWVWLYVKLMIIFLLTIPDFGRATYVYNNLIRPMKLQIVVAWRFNEYWRKCFVEKDDFLMHAERYVKENGTEALEKLIASKNTMCRPDAEVTNEIISTDNKEMLKTNGERLQTEHLDIKDLEAIEKRETPATKQDIPVIPKVGPSQSASSATTKGTAENDRAGGEVPQSSTSTQKEMQKEWTCALCLVTTSSEMTLNSHLSGRRHRARTEALIAKKQPTLQRQKDAVTNEILATDDKEMLKTNGDQRLQTEHRDIKEKKEIPATKQRTYDNTVASQKASSDIVETKATAESDRAGGEIPQSSSRLKEVQKEWTCALCLVTTSSEATLFSHLKGKKHMASCEAALKAKKQAALQKLKIYQPKEEVKQKNVNNMLNSKVKNGDGNVNKEEEVKQKNVNNVLNSKVKNGDGIVNKVLKSL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2345 489 PANTHER HVA22-LIKE PROTEINS 282 434 IPR004345 -
Psa7g2345 489 PANTHER HVA22-LIKE PROTEINS 4 294 IPR004345 -
Psa7g2345 489 SMART c2h2final6 253 277 IPR013087 -
Psa7g2345 489 SMART c2h2final6 384 408 IPR013087 -
Psa7g2345 489 MobiDBLite consensus disorder prediction 195 249 - -
Psa7g2345 489 SMART ZnF_U1_5 250 284 IPR003604 GO:0003676|GO:0008270
Psa7g2345 489 SMART ZnF_U1_5 381 415 IPR003604 GO:0003676|GO:0008270
Psa7g2345 489 MobiDBLite consensus disorder prediction 215 249 - -
Psa7g2345 489 MobiDBLite consensus disorder prediction 343 357 - -
Psa7g2345 489 SUPERFAMILY beta-beta-alpha zinc fingers 236 289 IPR036236 -
Psa7g2345 489 Pfam TB2/DP1, HVA22 family 30 106 IPR004345 -
Psa7g2345 489 MobiDBLite consensus disorder prediction 343 374 - -
Psa7g2345 489 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 282 434 - -
Psa7g2345 489 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 4 294 - -
Psa7g2345 489 Gene3D Classic Zinc Finger 237 283 - -
Psa7g2345 489 Gene3D Classic Zinc Finger 368 414 - -
Psa7g2345 489 SUPERFAMILY beta-beta-alpha zinc fingers 369 413 IPR036236 -
Psa7g2345 489 Pfam Zinc-finger of C2H2 type 384 408 - -
Psa7g2345 489 Pfam Zinc-finger of C2H2 type 253 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2345 Psa-Chr7 167113215 167116799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2345 252 448 C2H2 Transcription Factor Family AT5G61190 23.902 3.58e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2345 - - mtr:MTR_4g093510 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2345 7 167113215 167116799 Psa7g2345 7 167113215 167116799 ECH