Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2344 ATGCTGCAGCTTTCAATTCGACGCGCAAAATTGAAGTTTCTCATGCCTCAGATCTCTGCTTTGGGAAATTTCCATTTCTCAACAGCGGTTCAATCATCTTCCAGTAGCCGCAATGCTCCGAGGGTTCCGAATCTTATTGGGGGAAGGCTTCTTGACTCAAAATCATCAAATTTCATCGATGTTATAAACCCGGCAACACAAGAAGTTGTTTCACAAGTTCCGTTGACTACAGTTGACGAGTTTAAAGCTGCTGTATCTGCAGCAAAGAAGGCATTTCCATCATGGCGTAACACTCCGGTCACGACACGCCAACGTGTTATGTTGAAGCTCCAGGAGCTCATACGCAGAGATATGGATAAACTTGCTCTTAATGTGACCACTGAACAAGGAAAGACACTGAAGGATGCACAAGGAGATGTATTTCGTGGCTTAGAGGTGGTTGAACATGCTTGTGGAATGGGAACTCTACAAATGGGAGAGTATGTTTCAAATGTATCACACGGGGTCGACACATACAGCGTTAGAGAACCAATTGGTGTTTGTGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTTCCCGTGGCTGTTACATGTGGCAATACCTTTGTTCTAAAACCGTCAGAGAAAGACCCAGGTGCTTCTATGATGCTTGCAGAATTGGCGTTGGAGGCCGGTTTGCCTGAGGGTGTCTTAAATGTTGTTCATGGAACTCATGATGTTGTGAATGCCATTTGTGATGATGACGATATTAAAGCCATATCATTTGTTGGTTCTAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGAAAACGTGTCCAGTCTAATATGGGGGCCAAAAATCATGCAATTGTCATGCCAGATGCAAATGTCGATGCCACTATAAATGCTTTAGTCGCTGCTGGTTTTGGAGCTGCTGGACAGAGGTGCATGGCTCTCAGCACAGTTGTTTTTGTGGGAGGCTCCAAAGAATGGGAAACAAAAATCATAGAGCGTGCGAAAGCTCTTAAAGTAAATGCTGGAACTGAACCTGATACGGATCTTGGTCCGGTTATCAGCAAACAGGCAAAGGAGCGAGTGCACTCATTAGTTCAATCTGGAGTCGAGAGTGGTGCCAAACTGCTGCTTGATGGAAGAAATATAGTGGTCCCAGGATATGAATCTGGCAATTTTGTCGGGCCAACCATCTTATCAAATATCACTACCGACATGGAGTGCTACAAGGAGGAGATTTTTGGCCCAGTTCTTCTTTTTATGGAGGCGGATAGCTTAGAAGAGGCCATAAACATTATCAACAAAAACAAGTATGGAAATGGTGCTTCTATATTTACCACTTCTGGTGTTGCTGCTAGGAAATTTCAGACCGAGATTGAGGCCGGGCAGGTTGGTGTCAATGTTCCTATTCCAGTTCCTTTGCCATTTTTCTCATTTACCGGCAACAAGGCTTCATTTGCTGGCGATCTCAATTTCTACGGCAAGGCAGGGGTTAACTTTTTTACACAGATCAAAACAATAACTCAGCAGTGGAAGGATTCTGTAGGCGGTAGCAAGATTAACTTGGCAATGCCAACCTCTCAAAAATCTTGA 1614 0.4399 MLQLSIRRAKLKFLMPQISALGNFHFSTAVQSSSSSRNAPRVPNLIGGRLLDSKSSNFIDVINPATQEVVSQVPLTTVDEFKAAVSAAKKAFPSWRNTPVTTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMGTLQMGEYVSNVSHGVDTYSVREPIGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASMMLAELALEAGLPEGVLNVVHGTHDVVNAICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANVDATINALVAAGFGAAGQRCMALSTVVFVGGSKEWETKIIERAKALKVNAGTEPDTDLGPVISKQAKERVHSLVQSGVESGAKLLLDGRNIVVPGYESGNFVGPTILSNITTDMECYKEEIFGPVLLFMEADSLEEAINIINKNKYGNGASIFTTSGVAARKFQTEIEAGQVGVNVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFFTQIKTITQQWKDSVGGSKINLAMPTSQKS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2344 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 61 495 IPR016162 GO:0016491
Psa7g2344 537 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 44 518 IPR010061 GO:0004491
Psa7g2344 537 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 25 537 - -
Psa7g2344 537 CDD ALDH_F6_MMSDH 42 518 IPR010061 GO:0004491
Psa7g2344 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 312 323 IPR016160 GO:0016491
Psa7g2344 537 SUPERFAMILY ALDH-like 39 519 IPR016161 GO:0016491
Psa7g2344 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 287 487 IPR016163 GO:0016620
Psa7g2344 537 Pfam Aldehyde dehydrogenase family 53 514 IPR015590 GO:0016491
Psa7g2344 537 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 25 537 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2344 Psa-Chr7 167106814 167113470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2344 2 502 Aldehyde Dehydrogenase Gene Family AT2G14170 78.244 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2344 K00140 - gmx:100791508 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2344 7 167106814 167113470 Psa7g2344 7 167106814 167113470 ECH