Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2341 ATGGCAGCATCTTGCTATTATCATCAGAAAACTCATCTTCTCGCTTTCTTTTTCGTAACGTTATCACTCTTGCTAGTTCTAACATCTCATGCAACTCCATTATCATTCAACTATGACAACCTTAGTAGTGACAAAACAATTGCCTTCAATTTCTCAGGTGATGTTTCTCAAGATAACCAAGTTCTCCAACTCACAAAGTACGAGAAAGACAGTCTAGGTAGAGTCACATACTCAAAACTGTTTCATCTTTGGGACATAAACACAGGTGAAGTCAATGATTTCACCACTCGCTTCTCATTTACTATTAACGCCCCCAACAAAACCCATCACGGAGATGGAATCACCTTCTACTTGGCACACCCGAATTTTCCACTACCTGTTCCAAGAGACGGAAGTGGTATCGGTCTCGTGAGCCGAAATCAGTTGAGTAATCCAAATTACACAAAAGAAAATCCATTTGTTGCTGTGGAATTTGATACTTTTGTTAATGATTGGGATCCTAAATATGATCATGTGGGAATTGATGTTAGCTCTATCGCCACTTCTTACACGACGCAATGGTTCACTAATCATCTACCTGATTGGGTTGAATTCGGATTCACTTCCGCGACAGGGTTCTGGTGGGAGTATCATACTCTTAACGCATGGTCTTTCAAGTCAAGTTCAGATTTTGAAGCTGACGAGAACGGAACAAACACAGGACTTGTCGTAGGACTTAGTGTTATCGGTGCTGCTGCTGTTTTTATCTCTGTTATCGGGTTGGTTTGTTTTGTGAAACGGAAGCTGAGGAATAACAGAATGGAGGATGTTTTGCAGACGGATCTCGAAATGGATAATGATTTTGAAAGAAGCTCTCTACCTAGGAAGTTTACCTATGAAGAACTTGCTACCGCAACCAACAACTTTGCAAAGGAACACAAAATCGGAGAGGGTGGTTTCGGAGGAGTCTACAAAGGATTCATAAAAGACTTAAAAACTCATGTTGCAATTAAGAAGGTTTCTAAGGGATCAAATCAAGGAGTAAAGGAATATGCATCTGAAGTCAAAGTTATTAGCCAACTGAGGCAAAAGAATTTGGTTCAACTCTTTGGTTGGTGTCACAAACAAAATGATCTTCTTTTAGTTTACGAGTTTATGGAAAATGGAAGCTTAGATTCTTACCTTTTCAAAGGTAAAGGTTTGTTGACATGGCCAGTGCGATACAACATAGCTAGAGGCTTAGCCTCAGCAGTATTGTACCTACACGAAGAATGCGAACAATGTGTACTTCATAGAGACATAAAATCAAGCAATATCATGTTGGATAGTAGTTTTAACACAAAGCTCGGAGATTTCGGTTTGGCTAGACTAATGAACCATGAGACAGAATCAAAGACAACAGTTCTAGCCGGAACATATGGATATCTATCACCTGAGGCTGCAACTAGAGGTAAAGCTAGTAGAGAATCTGATGTATATAGTTTTGGAGTTGTTGCTTTGGAAATAGCTTGTGGTAGAAAAGCAATTGAACCAAGTCTTAGTGAAGAACATGCTTACTTGGTGGATTGGGTTTGGGAGCTTTATGGTGTAGGTGAAATTCTTAAAGCTGGTGATTCAAGATTGTATGGTGAATTCAATGAGAAGGAAATTGAGAGGTTGATGATTGTTGGACTTTGGTGTACTCATGTAGATCATGTTCAGAGGCCTATGATTAGACAAGTGGTTCAGGTTCTTAGTTTTGATGCTCCATTGCCTAGTCTTCCATTACAGATGCATTCATCTTTCAGTTCTGTGTCCTCTAAATACAAAAATGGGACCTCAACTTCAAGCAATAGTACCTTCACAGGTTCATCACAATCAAGCACAGCATTTGAAGTCGTTTCTCCTTCAGCTGCTCTTCTAAATACATACAACACCATTTGA 1902 0.3954 MAASCYYHQKTHLLAFFFVTLSLLLVLTSHATPLSFNYDNLSSDKTIAFNFSGDVSQDNQVLQLTKYEKDSLGRVTYSKLFHLWDINTGEVNDFTTRFSFTINAPNKTHHGDGITFYLAHPNFPLPVPRDGSGIGLVSRNQLSNPNYTKENPFVAVEFDTFVNDWDPKYDHVGIDVSSIATSYTTQWFTNHLPDWVEFGFTSATGFWWEYHTLNAWSFKSSSDFEADENGTNTGLVVGLSVIGAAAVFISVIGLVCFVKRKLRNNRMEDVLQTDLEMDNDFERSSLPRKFTYEELATATNNFAKEHKIGEGGFGGVYKGFIKDLKTHVAIKKVSKGSNQGVKEYASEVKVISQLRQKNLVQLFGWCHKQNDLLLVYEFMENGSLDSYLFKGKGLLTWPVRYNIARGLASAVLYLHEECEQCVLHRDIKSSNIMLDSSFNTKLGDFGLARLMNHETESKTTVLAGTYGYLSPEAATRGKASRESDVYSFGVVALEIACGRKAIEPSLSEEHAYLVDWVWELYGVGEILKAGDSRLYGEFNEKEIERLMIVGLWCTHVDHVQRPMIRQVVQVLSFDAPLPSLPLQMHSSFSSVSSKYKNGTSTSSNSTFTGSSQSSTAFEVVSPSAALLNTYNTI* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2341 633 Gene3D Transferase(Phosphotransferase) domain 1 379 590 - -
Psa7g2341 633 CDD STKc_IRAK 308 571 - -
Psa7g2341 633 PANTHER LECTIN RECEPTOR KINASE 191 628 - -
Psa7g2341 633 PANTHER LECTIN RECEPTOR KINASE 19 190 - -
Psa7g2341 633 Gene3D Phosphorylase Kinase; domain 1 287 378 - -
Psa7g2341 633 CDD lectin_legume_LecRK_Arcelin_ConA 34 221 IPR001220 GO:0030246
Psa7g2341 633 ProSiteProfiles Protein kinase domain profile. 302 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2341 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Psa7g2341 633 Pfam Protein kinase domain 303 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2341 633 ProSitePatterns Protein kinases ATP-binding region signature. 308 332 IPR017441 GO:0005524
Psa7g2341 633 PANTHER - 191 628 - -
Psa7g2341 633 PANTHER - 19 190 - -
Psa7g2341 633 SUPERFAMILY Protein kinase-like (PK-like) 285 595 IPR011009 -
Psa7g2341 633 ProSitePatterns Legume lectins alpha-chain signature. 192 201 IPR000985 -
Psa7g2341 633 ProSitePatterns Legume lectins beta-chain signature. 154 160 IPR019825 -
Psa7g2341 633 Gene3D - 190 235 - -
Psa7g2341 633 Gene3D - 32 189 - -
Psa7g2341 633 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 222 IPR013320 -
Psa7g2341 633 SMART serkin_6 302 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2341 633 Pfam Legume lectin domain 34 185 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2341 Psa-Chr7 167067222 167069255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2341 14 584 Receptor kinase-like Gene Family AT5G10530 42.766 3.22e-157 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa7g2341 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2341 - - cam:101491058 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2341 7 167067222 167069255 Psa7g2341 7 167067222 167069255 ECH