Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2340 ATGTATATCCAATTCTCCAATCATAATTTCTCATTAATGTTGTTATCTATTTTCTTATTTTTAAACTTGATTATTCCAAATGCATCCTCTTTGTCCTTTAATTTCACTAGTTTTGATCCTAATGACAAGACCATAATCTACAATGGATCAGCAAATCCAGCATCATCAGAAATCCAACTTACAATAAACCAACAAGGCAAGCTCATGAATGGAAGCATTGGTAGAGCCACATATAGCCAACCACTTCTCCTATGGAACAAAACCACAAACAATCTCACAGACTTCACATCCCATTTCACTTTCACCATAAATTCCCAGAGAAAACAATTTTATGGAGACGGAATTGCTTTCTTTCTTGTCCCTTATGGTTCAGAGGAGCCTAATGCAACCCAGGGAGGTTCTATGGGACTAACGCTTGATAACCAAGAAATAAACTCAACTGAAAATTTGAAATATCCATTTGTTGCGGTTGAGTTTGATATCTTTAGCAATTACTGGGATCCACCACATGAACATGCCGGAATCGACATCAACTCTATGAGATCGGTTGCTAATACGACATGGCTGGCTGATATCAAACAAGGTATGCTCAATGAGGCTTGGATCAGTTATAGTGCTAGTTCACTAAATCTAAGTATTATATTCACAGGTTTTAGTAATGGAACTTCTACAACTGTGAATCAGACTTTATCTACCATAGTTGATCTCAGACTTTATCTGCCAGAACTTGTTTCTATTGGCTTCTCAGCTGCCACAGGAACATCAATCGCTATTCATAGTATATCTTCATGGGATTTTAGCTCAACTTTAGAAGCAGAACAAGATAACAACAAAACAATTACTGCTCCTAGTTATAAGAAGAAAAAGGCCAAGACAGGAATAGCAGTTGGATTGGGAATTGGTGGATTTGTTTTGATATGTGTGTTCGTTTTTATTTCCGTTTACTTGTGGAAGAAGTGGAAGAAAGGAAAAGAAGAGGAAGATGGTGAATTTGAAGAGTACATGGGTGAGGATTTTGGAAGAGGGACAGGACCCAAGAAGTATACATATGCAGAACTAGCACATGCGGCTAATAATTTCAAAGATGAGCATAAGCTAGGACAAGGAGGATTTGGAGGTGTTTATAGAGGGTTTCTTAAAGATACAAAATCTTATGTTGCTATTAAGAGGGTGTCAGAAGATTCTCATCAAGGGATAAAGGAGTTTGCATCAGAAGTAACGATTATTAGCAAATTAAGGCATAGAAATCTAGTGCAATTGATTGGTTGGTGTCATGAAAAGAAAAAGCTATTGCTTGTATATGAGTACATGCCAAATGGTAGTTTAGACATTCATCTTTTCAAAAAACAAAGCTTTTTGAAATGGGCTGTTAGATATACAATAGCTAGAGGCTTGGCTTCTGCATTGTTGTATTTGCATGAAGAATGGGAACAATGTGTTGTACATAGAGACATAAAAGCAAGCAACCTAATGCTTGATTCAGAGTTTAATGCAAAACTCGGAGATTTTGGTTTAGCAAGGTTTGTGGATCATGGAAAAGGTGCACAAACAACAGCTTTAGCAGGGACCATGGGATACATGGCTCCTGAATGTGCTACGACCGGAAGGGCTAGTAAAGAAACAGATGTGTATAGTTTTGGAATTGTTGCTTTAGAAATAGCTTGTGGAAGAAAAGCAGTAAATATTAAGGCTCAAGAAAATGAAGTACATATTGTTGAGTGGGTTTGGGGGCTATATGGAAGAGGGAGAATTCTTGAAGCAGTGGATCCAAGACTAAGTGGAGATTTTGATGAGGAACAAATAAAGTGCTTAATGATTGTTGGTCTTTTGTGTGCTCACCCTGATCCTAATAACAGGCCTTCAATGAGACAAGCTATTCAAGTGCTTAATTTTGAAGCTCCACTGCCTAATCTTTCATCAAGTATGCCTATACCAACATATGCTGAGGGCCCTTTTAATTCTTTCACAGCTCCATTTAGCATAAGTGGTTCAGAGGAAGGTCAAAGCAAGAATATAATAAGCTTTAGTTCAAACACAAACTCAACTACTTCTGATGTTTCACCTTCTATGTCGCTTTTGTATTCTAGATGA 2091 0.374 MYIQFSNHNFSLMLLSIFLFLNLIIPNASSLSFNFTSFDPNDKTIIYNGSANPASSEIQLTINQQGKLMNGSIGRATYSQPLLLWNKTTNNLTDFTSHFTFTINSQRKQFYGDGIAFFLVPYGSEEPNATQGGSMGLTLDNQEINSTENLKYPFVAVEFDIFSNYWDPPHEHAGIDINSMRSVANTTWLADIKQGMLNEAWISYSASSLNLSIIFTGFSNGTSTTVNQTLSTIVDLRLYLPELVSIGFSAATGTSIAIHSISSWDFSSTLEAEQDNNKTITAPSYKKKKAKTGIAVGLGIGGFVLICVFVFISVYLWKKWKKGKEEEDGEFEEYMGEDFGRGTGPKKYTYAELAHAANNFKDEHKLGQGGFGGVYRGFLKDTKSYVAIKRVSEDSHQGIKEFASEVTIISKLRHRNLVQLIGWCHEKKKLLLVYEYMPNGSLDIHLFKKQSFLKWAVRYTIARGLASALLYLHEEWEQCVVHRDIKASNLMLDSEFNAKLGDFGLARFVDHGKGAQTTALAGTMGYMAPECATTGRASKETDVYSFGIVALEIACGRKAVNIKAQENEVHIVEWVWGLYGRGRILEAVDPRLSGDFDEEQIKCLMIVGLLCAHPDPNNRPSMRQAIQVLNFEAPLPNLSSSMPIPTYAEGPFNSFTAPFSISGSEEGQSKNIISFSSNTNSTTSDVSPSMSLLYSR* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2340 696 Gene3D - 28 283 - -
Psa7g2340 696 ProSiteProfiles Protein kinase domain profile. 360 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2340 696 Gene3D Transferase(Phosphotransferase) domain 1 437 650 - -
Psa7g2340 696 Pfam Legume lectin domain 30 278 IPR001220 GO:0030246
Psa7g2340 696 PANTHER RECEPTOR LECTIN KINASE 16 691 - -
Psa7g2340 696 SMART serkin_6 360 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2340 696 SUPERFAMILY Protein kinase-like (PK-like) 344 646 IPR011009 -
Psa7g2340 696 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 280 IPR013320 -
Psa7g2340 696 CDD STKc_IRAK 366 630 - -
Psa7g2340 696 PANTHER - 16 691 - -
Psa7g2340 696 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Psa7g2340 696 CDD lectin_legume_LecRK_Arcelin_ConA 31 270 IPR001220 GO:0030246
Psa7g2340 696 Gene3D Phosphorylase Kinase; domain 1 345 436 - -
Psa7g2340 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Psa7g2340 696 Pfam Protein kinase domain 360 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2340 Psa-Chr7 167064148 167066947 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2340 13 647 Receptor kinase-like Gene Family AT5G10530 48.532 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa7g2340 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2340 - - mtr:MTR_4g093080 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2340 7 167064148 167066947 Psa7g2340 7 167064148 167066947 ECH