Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2320 ATGGAGGGTGGAAACAGACCTGAAGCTGAGCGATGGCTTTACACAGCCAACAAGCTTCTGAGCGCACGTGATCTGCACGGTGCACGTTCCTTTGCGATTCGTGCCCGAGAGTCCGACCCGACTTTCGATGCCTCCGAGCTTCTCCTGGCTGTGATTGACACTCTGCTAGCTGGAGAATCGCGGATCAACGATCACCACCGTGATTGGTATGGGATCCTTCAAATCCTCCGCTACACCACCAATATAGACCACATCGCTAACCAGTATCGCCGCCTCGCTCTCCTCCTTGACCCGAACCGGAACCCGTTTGCTTTCTCCGGTCATGCTTTCTCTCTCGTTCATGATGCTTGGTCTGTTCTATCCAATTCTGCTAAGAAGGCTATGTACGATAGCGACCTGCGGTTGCTCACTACACCACCTGTTCCACCGCAGCCGCAGCCGCAGCCTCAACCTCCTCCGCAACCGGTGCCGCAGTATCAGCAGTCTCCAACTCATAACACTACGCCGAAGAAAATTCCTAGACCGAGGGACGGTGTGAGTGCGGGTGCGGGTGCGACTGAGCCGATTCGGCAGACACCGAATCGGGACCCTTGCGAGCCAGCTGAGTCGACTCGGCAGACGCGGACGGCGAGTGCTGCTGAAACTGAAGGTAACATTAGCTTCTGGACTTTGTGTCCTTACTGTTACGTTTATTATGAGTATCCGAAGGGGTATGAAGAGTGTACCCTGCGGTGCCAGAGTTGTAAGAGAGGGTTTCATGCGGTGGTGATACGTTCGCCGCCGTTGAACGAGATAGATGCTTCGTTTTGCACTTGGGGATTTTTTCCGTTAGGGTTTTCTGGTGATTCTAAGGACGTGAGTGGAACTTCTTCCAATTGGAACCCGGTTTGTCCTCTGTTTCCTTCCTCCTTGAAAGGAGGATCGACGAATAGGAAAAAAAATTGGGTTTACTATGATGAAGCGGCAACTGCGGCCTTCATCGATATTTCTGATCCAAGTGATGATGATTCTGATGATGGGGATTGGAGGGGTGGTACTGGTAAGAAAAGAGGGTTGAAGAGTTCAAGTGTTACCAGGAAAAAGATTAGGAAAAATTCTGGTAATGCTAGTGGTAGAGAAACTGTGGAGAGACCTAGGAGGAGTGCTACTGGTGCTGCAGCAGGGAATGTGAGCGAGAAGAATGTTGGTGATGTTGGTGCTGTTGATGCTTCTGGTGTAAAGGCTGAAGCTAGTAAGAAAGCTGTGTCAGGTAGTTCCAATAAGAAGGGTGCTGTAAACTTGGGGAAGTTGGATTTGAATGTTGAGTGCAGTAACGACGCAGAGGAGCCTTCCCGTGGAGTCCGTGACCGTGAAGGGAATGCAACTGGCAATGCAGAGGATAATATTGAAGGGATTGGTTTTTTTGAAGGTCTCGATGAGTTTCTCAGTAGCTTACCCATTCTTAATGCAGTGGCAGATGATAAGGTTAAGGGTCATTAG 1479 0.5037 MEGGNRPEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLAVIDTLLAGESRINDHHRDWYGILQILRYTTNIDHIANQYRRLALLLDPNRNPFAFSGHAFSLVHDAWSVLSNSAKKAMYDSDLRLLTTPPVPPQPQPQPQPPPQPVPQYQQSPTHNTTPKKIPRPRDGVSAGAGATEPIRQTPNRDPCEPAESTRQTRTASAAETEGNISFWTLCPYCYVYYEYPKGYEECTLRCQSCKRGFHAVVIRSPPLNEIDASFCTWGFFPLGFSGDSKDVSGTSSNWNPVCPLFPSSLKGGSTNRKKNWVYYDEAATAAFIDISDPSDDDSDDGDWRGGTGKKRGLKSSSVTRKKIRKNSGNASGRETVERPRRSATGAAAGNVSEKNVGDVGAVDASGVKAEASKKAVSGSSNKKGAVNLGKLDLNVECSNDAEEPSRGVRDREGNATGNAEDNIEGIGFFEGLDEFLSSLPILNAVADDKVKGH* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2320 492 MobiDBLite consensus disorder prediction 142 159 - -
Psa7g2320 492 Pfam DnaJ domain 68 130 IPR001623 -
Psa7g2320 492 MobiDBLite consensus disorder prediction 197 213 - -
Psa7g2320 492 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 492 - -
Psa7g2320 492 MobiDBLite consensus disorder prediction 333 391 - -
Psa7g2320 492 SMART dnaj_3 67 125 IPR001623 -
Psa7g2320 492 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Psa7g2320 492 CDD DnaJ 68 122 IPR001623 -
Psa7g2320 492 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Psa7g2320 492 MobiDBLite consensus disorder prediction 435 458 - -
Psa7g2320 492 SUPERFAMILY Chaperone J-domain 64 133 IPR036869 -
Psa7g2320 492 MobiDBLite consensus disorder prediction 435 456 - -
Psa7g2320 492 Gene3D DnaJ domain 57 138 IPR036869 -
Psa7g2320 492 MobiDBLite consensus disorder prediction 142 213 - -
Psa7g2320 492 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2320 Psa-Chr7 165760946 165764317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2320 8 491 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.034 2.16e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2320 - - cam:101509006 732.635