Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2311 ATGGGACTTCATCACAGAAAACTCCTAACATGTGATTTTTTCTGTCATGCTGTAGTGTCTTGTTCCACAAACTGTGATGACTGTATCAAAGACTGCAGCTACCACCCTCCACCTCCACCACCACCATCTTTTAACCACACCAAACACAAAACCTTCACTTACTTGATCATAAGTTTTTCTATTGTAGGAGCTATTTTCCTTGTTTTATGCTGCTATGCTTTCTATGTCAAGTTTTTCTCCCGTAGGAACAGTTCAAGAAGAAGAACCTTGCTAACAAGGCAACAAACAGAACATGGTTTTGCTGTTGATGAACAACATGATGATGGCTCTGTTGTTGACCACCCCATATGGTATATTCGAACTCCTGGTCTTCAACAATCTATTATTAATGCAATCACTGTTGTTAAATTCAAGAAAGGTGATGGCTTGATTGATGGGTCGGATTGTTCTGTTTGTTTGAGTGAGTTTGAGGAAGATGAGAATCTTAGACTTTTGCCTAAGTGTAACCATGCTTTTCATTTACCATGTATTGATACTTGGCTTGTATCACATACTAGTTGTCCTATGTGTAGAGCTCCTATTGTTGTTGATCCTTTAAGGATTCCTTCTATGGAGCCTAATGTTTTTGTGGAAAGTTCTCGGATGGATGATTCGGAAAATAACCGTGGAAATGGATTTGAAGATAGTGTTGTTGATCACTTGAGAAATGGTGATGAAGAAGAAGAAGAAGAAGAAGGAGTAGAGGTTGAGGAAAATGAGAGTTCAAGGTTAGAGATGGTAAATGTGCAGCCAAGAAGATCAGTTTCTTTTGATTCTTCTTCTGCTGCTAAGATCAATCTTGCTCTTTCCAATAAGCAAGAGGTAGGTGAAGTCAATGAACAAATTGTTTCAAAGAGGGTTGGTGGAAATGGCAATATAGTAAATATGCATAGTGCTCCTAGTTCAATGGATAGGTCAAGATCCTTCAATGGAAAATACCTACTGTCTTTGTATAGCAGCAATCAGAAGAAGTTAAATGTTCCACCTAGAAGCTTTTGA 1038 0.3834 MGLHHRKLLTCDFFCHAVVSCSTNCDDCIKDCSYHPPPPPPPSFNHTKHKTFTYLIISFSIVGAIFLVLCCYAFYVKFFSRRNSSRRRTLLTRQQTEHGFAVDEQHDDGSVVDHPIWYIRTPGLQQSIINAITVVKFKKGDGLIDGSDCSVCLSEFEEDENLRLLPKCNHAFHLPCIDTWLVSHTSCPMCRAPIVVDPLRIPSMEPNVFVESSRMDDSENNRGNGFEDSVVDHLRNGDEEEEEEEGVEVEENESSRLEMVNVQPRRSVSFDSSSAAKINLALSNKQEVGEVNEQIVSKRVGGNGNIVNMHSAPSSMDRSRSFNGKYLLSLYSSNQKKLNVPPRSF* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2311 345 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 16 332 IPR044675 -
Psa7g2311 345 PANTHER RING-H2 FINGER PROTEIN ATL54 16 332 - -
Psa7g2311 345 Pfam Ring finger domain 148 191 IPR001841 -
Psa7g2311 345 CDD RING-H2_PA-TM-RING 148 191 - -
Psa7g2311 345 SUPERFAMILY RING/U-box 136 197 - -
Psa7g2311 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 197 IPR013083 -
Psa7g2311 345 ProSiteProfiles Zinc finger RING-type profile. 149 191 IPR001841 -
Psa7g2311 345 SMART ring_2 149 190 IPR001841 -
Psa7g2311 345 MobiDBLite consensus disorder prediction 235 255 - -
Psa7g2311 345 MobiDBLite consensus disorder prediction 237 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2311 Psa-Chr7 163856951 163857988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2311 59 259 C3H Transcription Factor Family AT1G72220 42.574 1.69e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2311 - - mtr:MTR_4g093830 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2311 7 163856951 163857988 Psa7g2311 7 163856951 163857988 ECH