Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2305 ATGGCTACCCTTTATCCACTTGTTCAACTTATTAAAGGTCGTGATCATGTTCTAAAGTCAATAGAAAGGAGTGTGAATGTTGAGGGAGGGAGTAAGGAAGGAAGCATAACAGTGACATGGGAGAATCTGAGAGTCACTGTTCCAAATGGAAGCAAAAGGAAACCTATTCTTGAGGGTCTTACTGGTTATGCTCAACCCGGAAGGCTTTTGGCTATAATGGGTCCTTCTGGGTCTGGAAAATCCACACTTCTTGATGCTTTAGCAGGAAGGTTAAGCTCAAACATAAAGCACACAGGAAATATTCTAATCAATGGCCACAAACAAGCACTGGCTTATGGAATATCAGGTTATGTAACACAAGATGAGGCTATGCTGTCAACGTTAACGGCCGGAGAAACTTTATACTATTCAGCTCAGCTTCAATTTCCAGATTCCATGTCCATAACAGAAAAAAAGGAGCAAGCAGATCTTATACTCAGAGAAATGGGCCTAATAGATGCTGTTAACACAAGGGTTGGAGGATGGAGTTCTAAAGGTCTAAGTGGAGGACAAAGGAGGAGACTTAGCATTTGCATCGAGATTCTAACGCGACCGAGACTTCTCTTCCTTGATGAACCGACGAGCGGACTCGATAGTGCAGCTTCTTATTATGTTATGAGTAGGATCGCGCGTTTAAATTTAAGCGACGGCGTTCGAAGGACTGTTGTTGTATCCATCCACCAACCTAGCAGTGAAGTTTTTGAACTTTTTCATGACCTTTGTCTTCTCTCTTCTGGTGAAACTGTATATTTTGGTCCATCCTATGATGCAAATCAGTTTTTTGCTGCAAATGGCTTTCCTTGTCCAACACTCCACAATCCTTCTGATCACTATTTAAGGATAATAAACAAAGATTTTGAAATGGATGATGATGTTGAAGAAGGCTTTGGTAAGGGGGTTACCACAGAAGAAGCAATTGATATCCTTGTAAAGTCTTACAAATCATCTCGAATTAGAAAACGAGTTAAAAAAGAAGTTGCGAAAATAAGTGTAAGTGACTCTGGTGCAATAGGGAAGAAAAGGATTCATGCTGCATTTATCACTCAATGTCTTGTTCTTATAAGAAGATCTTCTTTGCAATTGTTTCGAGACGTAGGCAACTACTGGCTACGTTTAGTTGTCTTTGTTATAATTGCTATAAGCATTGGTTCTATCTTCTATGGCATTGGTTCAACTAGTGGATCAGGATCTATTCAGGGAAGAGGTTCACTCCTCACATTTCTTATTTCAGTTCTCACTTTCATGACCCTTGTTGGTGGATTCTCTCCTCTCTTGGAGGAAATGAAGGTATTTGAACGAGAGAGATTGAATGGACACTATGGTGTTAGTGCTTTCCTGATTGGAAATATATTCTCAGCTGTTCCTTACATTCTAATGATCTCTCTAATTCCTGGAGGAATAGCATACTACCTTTGTGGAATGCACAGAGGACTAGAACACTTTGTATACTTCATTTCATTGCTATTAGCCATTGTGATGTGGGTTGAAAGTCTCATGTTGGTTGTTGGAAGCATATCACCAAACTATGTAATAGGAATGTTCATTACCGGTGGAATTGAAGGACTCATGATATTAACAGCTGGGTTCTATAGATTACCAAATGAACTTCCCAAACCACTATGGAAATACCCTTTATACCATATATCATTTCTTAAGTATGCATTTCAAGGATCATTCAAGAATGAATTTGAAAAGTTGAATGTTTCTATGGGGACAAAAACTATGAGTGGTAGGGAAATATTGGATGAGACATGGCATGTTGAAATGGGTTACTCAAAGTGGGTTGATCTTGTTATCATGTTTGGTATGATTGTGTTGTATAGAGTTTTGTTCTTGGTCATCACTAAGAGTAAGGAGAAGTTGAAGCCTTTTGTTGCACTCATAAGTAGTCTTTGA 1935 0.3907 MATLYPLVQLIKGRDHVLKSIERSVNVEGGSKEGSITVTWENLRVTVPNGSKRKPILEGLTGYAQPGRLLAIMGPSGSGKSTLLDALAGRLSSNIKHTGNILINGHKQALAYGISGYVTQDEAMLSTLTAGETLYYSAQLQFPDSMSITEKKEQADLILREMGLIDAVNTRVGGWSSKGLSGGQRRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIARLNLSDGVRRTVVVSIHQPSSEVFELFHDLCLLSSGETVYFGPSYDANQFFAANGFPCPTLHNPSDHYLRIINKDFEMDDDVEEGFGKGVTTEEAIDILVKSYKSSRIRKRVKKEVAKISVSDSGAIGKKRIHAAFITQCLVLIRRSSLQLFRDVGNYWLRLVVFVIIAISIGSIFYGIGSTSGSGSIQGRGSLLTFLISVLTFMTLVGGFSPLLEEMKVFERERLNGHYGVSAFLIGNIFSAVPYILMISLIPGGIAYYLCGMHRGLEHFVYFISLLLAIVMWVESLMLVVGSISPNYVIGMFITGGIEGLMILTAGFYRLPNELPKPLWKYPLYHISFLKYAFQGSFKNEFEKLNVSMGTKTMSGREILDETWHVEMGYSKWVDLVIMFGMIVLYRVLFLVITKSKEKLKPFVALISSL* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2305 644 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 283 IPR003439 GO:0005524
Psa7g2305 644 Pfam ABC transporter 59 208 IPR003439 GO:0005524
Psa7g2305 644 Pfam ABC-2 type transporter 361 576 IPR013525 GO:0016020|GO:0140359
Psa7g2305 644 SMART AAA_5 66 259 IPR003593 -
Psa7g2305 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 273 IPR027417 -
Psa7g2305 644 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 14 637 - -
Psa7g2305 644 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 14 637 - -
Psa7g2305 644 CDD ABCG_EPDR 35 265 - -
Psa7g2305 644 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524
Psa7g2305 644 Gene3D - 36 341 IPR027417 -
Psa7g2305 644 Pfam ABC-2 type transporter 240 296 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2305 Psa-Chr7 163747785 163750690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2305 15 244 Calmodulin-binding Proteins AT2G36910 30.579 8.34e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2305 K05681 - gmx:100790102 982.245