Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2296 GGCTGGTGTGAATGTGCCTGATGAAGTTGGGCAGAAAGCTTTGACTAAAGCTTTAGCTGAAATGCAATGTATTCCGGTGTTTCTTGATGAGGATATAGTTAATGAATACTATAATGGTACGCCTGAAGGAGTAGAAGATCAAGGAAAGCTAACCCGTGTGGTTGCGTTTCCTATTGGAATTGACTCTGAAAGATTTATTAGAGCCCTTACGCTTCCTGAAGTCCAGAATCACTTGAAAGAATTGAAAGAAAGATTTGCAGGCCGAAAGGTAATGTTGGGCGTTGATCGTCTTGACATGATAAAAGGAATTCCTCAGAAAATCTTGGCTTTTGAGAAGTTCCTAGAAGAGAATGCACATTGGCGTGATAAAGTTGTCTTGCTGCAAATTGTTGTGCCTACTAGGACATATGTCTCTAAATATCAAAAGCTTACAAGCCATGTGCATGAAATTGTTGGACGCATCAATGGAAGATTTGGAACACTTACTTCTGTCCCGATACACCATCTGGATCAGTCAGTTGACTTTCATGCGTTATGTGCACTCTATGCAGTTACTGTAGCACTTATTGCATCATTAAGGTGCAGCACAATCTCTTGGTGCTGGTGCTATCTTGGTAAATCATTGGAGAAAGAAAAAGTACATAATAGTGATGGTAAGGATGACAATGCCTCAAACGTACTTCCTGGCACCACAACATCAAGTGACATGGACATTGATGTTTCTATCAATAAAGGAAAAGGAAAAGCAGTTGCAACCATGTCTGACAGTAACGAAACCAATAGTCAAGAGGCTTCTGGATCACTTGCAAAGACTATCTTTATTTTCAAGCTTTTGACAGAGATATTATTGATGGACAAGAAAGTTGATGGTGATTGGAGGCAGAAATTGGCAACCAGGGCTAACCAATTTATGGTGGATGCTTGTGTCCGTTACACAGAGGCAAGGAAAAAGGTTTTTAGCGAGATTAGTTCTACCGTCAATGAATATGTTGATTCAAGTCATGGTGTTAAGCCTCCGGGCAATGAAATTTTGGTTTTTATTGATCTGATTAATGATGTTTTGGCTGCTCACACACCTGCTGGCGCATGCATCTCAGTTGAGGCCTCTGCCACATCTATTGATGCTGGCTTGGTTAAATCATTTACTCGTACCCTCCAAATTTTGGACTTGGATCATATTGATTCATTTAAAGTTGCAACTGATATGTCTTCTCAAGCCAATCACGGTTCTCGTCAAGCTGGCCAAGTGGGGCCTTACACAAGTCAGACATATGGTGGGTTTGAAGCTGTTACAGATGATATGGAACACAATCAAGATCTTAATGGGAACTTTCCTCCTGCCAATGAGGATGATTACATGCATGAAAATTCTGAGGATGCAAGAGATGTTGAAAATGGAATGGAAAATGTGGGTCTGCAATTGGAAATCCAGCCTCATGGCCAAGAAAATCTTGATGAAGATGACGAGAGAAGATCAGGAAGCTGA 1486 0.4085 AGVNVPDEVGQKALTKALAEMQCIPVFLDEDIVNEYYNGTPEGVEDQGKLTRVVAFPIGIDSERFIRALTLPEVQNHLKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAHWRDKVVLLQIVVPTRTYVSKYQKLTSHVHEIVGRINGRFGTLTSVPIHHLDQSVDFHALCALYAVTVALIASLRCSTISWCWCYLGKSLEKEKVHNSDGKDDNASNVLPGTTTSSDMDIDVSINKGKGKAVATMSDSNETNSQEASGSLAKTIFIFKLLTEILLMDKKVDGDWRQKLATRANQFMVDACVRYTEARKKVFSEISSTVNEYVDSSHGVKPPGNEILVFIDLINDVLAAHTPAGACISVEASATSIDAGLVKSFTRTLQILDLDHIDSFKVATDMSSQANHGSRQAGQVGPYTSQTYGGFEAVTDDMEHNQDLNGNFPPANEDDYMHENSEDARDVENGMENVGLQLEIQPHGQENLDEDDERRSGS* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2296 494 Pfam Glycosyltransferase family 20 43 193 IPR001830 GO:0003824|GO:0005992
Psa7g2296 494 MobiDBLite consensus disorder prediction 213 234 - -
Psa7g2296 494 Gene3D Glycogen Phosphorylase B; 62 196 - -
Psa7g2296 494 MobiDBLite consensus disorder prediction 220 234 - -
Psa7g2296 494 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 403 489 - -
Psa7g2296 494 MobiDBLite consensus disorder prediction 480 494 - -
Psa7g2296 494 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 223 284 - -
Psa7g2296 494 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 285 401 - -
Psa7g2296 494 MobiDBLite consensus disorder prediction 473 494 - -
Psa7g2296 494 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL1-LIKE PROTEIN 223 284 - -
Psa7g2296 494 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL1-LIKE PROTEIN 285 401 - -
Psa7g2296 494 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL1-LIKE PROTEIN 403 489 - -
Psa7g2296 494 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2296 Psa-Chr7 163236003 163238349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2296 1 39 Trehalose Biosynthesis Gene Families AT1G78580 84.615 7.10e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2296 K16055 - aip:107608336 339.347