Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2293 ATGGCTTTCCTTGATCCATCTGAAGGTTTTGAAATCAAAACCTCTTCAGAATCATCAGTTCTAGACATTGAGGCCTCCACAACCACACCAGAAGGTGACCATGGTATATGCCTAACATGGAAGGATATATGGGTGAATACAATCGCAAAAGGAAAGAATGGAAGAAGATCAATTCTTCAAGGACTAACTGGTTATGCTAAACCAGGTGAACTATTAGCCATTATGGGTCCTTCTGGCTGTGGCAAGTCTACACTACTTGATGCTTTAGCAGGGAGATTAGCCACAAACACAAGACAAACTGGGGAGATTCTAATCAATGGTCACAAACAAGAATTATCATATGGAACTTCGGCTTATGTGACACAAGATGATACATTATTAACAACCTTAACTGTCAAAGAAGCAGTTTACTATTCAGCTCAACTCAATTACCTGACACAATGTCCAAACAAGAGAAGAAACAAAGACTTATTCTACAATCAAAGAAATGGAATTGCTTCCTTGGGGAAAAAAGATGGAATTCAAAGGACTATTATCACTTCTATCCATCAACCTAGCTCTGAAGTTTTTCAACTTTTTGATAACCTTTGTCTTCTCTCTTCGGGTAAAACAGTTTACTTTGGACCTGCTTCGGCCGCATCTGAGTTTACTATTCAGCTCAACTTCAATTACCTGACACAATGTCCAAACAAGAGAAGAAACAAAGACTATTCTACAATCAAAGAAATGGGTCTTCAAGATCCAACTAACACAAGAATTGGAGGGTGGGGTGTGAAAGGCATAAGCGGGGGTCAGAAAAGAAGAGTTAGCATTTGCATTGAGATTTTAACACATCCTAGTCTTCTTTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCCTCTTACTATGTCATGAAAAGAATTGCTTCCTTGGGGAAAAAAGATGGAATTCAAAGGACTATTATCACTTCTATCCATCAACTAGCTCTGAATTTTGAATGGGATTTCTGTCCTATGCCTCTCCAAAATCCATCTGATCATTTACTTAAAACTAAAGTTCCACTGAAGAAGGCAATTAGTATCCTTGTAAGTTCTATTAATCATCTGAAATTAACAGAAGATGTTCACAATGAAGTTGCTAGCTGCCTATCCAAAAAGCAAATGAAATCAATGGACAAGAACAAAGGGCATGCAGGGTTCTTTAATCAATGCTTAGCTCTTATCAAACGCTCGTCATTGAACATGTTTCGTGATCTAGGCTATTATTGGTTACGATTAGGCATATATATTGCATTGGCTTTAAGTTTAGGAACTGTTTTCTATGATTTTGGTACAAGTTATGCCTCAATTAAGGATCGTGGTTCACTTCTTTCATATATCTCTGGATTCTTAACTTTCATGAGCATTGGTGGATTTCCTTCCTTTGTGGAAGACATGAAAGTATTTCAAAGAGAGAGACAAAATGGACATTATGGTGTGGTAGCATATGTGATTGGGAACACATTTTCGTCGGTTCCATTCATTTTGGTGATTTCAATAATTCCGACAGCTATAACTTACTACCTATGTGGTCTACAAAAAGGATATGAACATTTTTTCTTCTTTGCATGTGTTTTATTTTCAAGCCTGTTGTTAGTTGAGAGCCTCATGATGATAGTTTCAAGCATTGTTCCGAACTTTCTAATGGGAATCGTAACGGGCGCTGGAATTCAAGGAGTCATGATGTTGGTTGGAGGGTTCTTTAAATTGCCACATGATATTCCCAACATATTTTGGAAATATCCATTCCACTATGTTGCATTTCATACATATGTAACCGAGGGATTGTTCAAGAATGAGTATGAAGGACTAAGGTTCGATAATCCAAACGTTCAAGGCGTAAATCGTTACATTACTGGTGAAGTGGTTTTGACAGATATTTGGCAAATTGACATGAATTATTCAAAGTATGTTGATCTTGCAATTTTGCTTGGGATGATTGTTTTGTATCGTGTTTTGTTTCTTTTTATCATCAAAGGTAGAGAGAAGATGAAACCTGTTGTTGGATCAATGTTATCTAGCATGGGAGAATCTTCCAAGACAGTAATACATGTTGAGAAGCCTGATGCTACTCCTCTGAATGGGCATGTTGTGTAA 2121 0.3739 MAFLDPSEGFEIKTSSESSVLDIEASTTTPEGDHGICLTWKDIWVNTIAKGKNGRRSILQGLTGYAKPGELLAIMGPSGCGKSTLLDALAGRLATNTRQTGEILINGHKQELSYGTSAYVTQDDTLLTTLTVKEAVYYSAQLNYLTQCPNKRRNKDLFYNQRNGIASLGKKDGIQRTIITSIHQPSSEVFQLFDNLCLLSSGKTVYFGPASAASEFTIQLNFNYLTQCPNKRRNKDYSTIKEMGLQDPTNTRIGGWGVKGISGGQKRRVSICIEILTHPSLLFLDEPTSGLDSAASYYVMKRIASLGKKDGIQRTIITSIHQLALNFEWDFCPMPLQNPSDHLLKTKVPLKKAISILVSSINHLKLTEDVHNEVASCLSKKQMKSMDKNKGHAGFFNQCLALIKRSSLNMFRDLGYYWLRLGIYIALALSLGTVFYDFGTSYASIKDRGSLLSYISGFLTFMSIGGFPSFVEDMKVFQRERQNGHYGVVAYVIGNTFSSVPFILVISIIPTAITYYLCGLQKGYEHFFFFACVLFSSLLLVESLMMIVSSIVPNFLMGIVTGAGIQGVMMLVGGFFKLPHDIPNIFWKYPFHYVAFHTYVTEGLFKNEYEGLRFDNPNVQGVNRYITGEVVLTDIWQIDMNYSKYVDLAILLGMIVLYRVLFLFIIKGREKMKPVVGSMLSSMGESSKTVIHVEKPDATPLNGHVV* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2293 706 Pfam ABC-2 type transporter 398 609 IPR013525 GO:0016020|GO:0140359
Psa7g2293 706 Gene3D - 41 330 IPR027417 -
Psa7g2293 706 ProSitePatterns ABC transporters family signature. 261 275 IPR017871 GO:0005524
Psa7g2293 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 327 IPR027417 -
Psa7g2293 706 SMART AAA_5 68 350 IPR003593 -
Psa7g2293 706 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 361 IPR003439 GO:0005524
Psa7g2293 706 Pfam ABC transporter 60 289 IPR003439 GO:0005524
Psa7g2293 706 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 232 324 - -
Psa7g2293 706 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 333 701 - -
Psa7g2293 706 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 163 222 - -
Psa7g2293 706 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 17 144 - -
Psa7g2293 706 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 232 324 - -
Psa7g2293 706 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 163 222 - -
Psa7g2293 706 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 333 701 - -
Psa7g2293 706 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 17 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2293 Psa-Chr7 163026532 163030928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2293 245 324 Calmodulin-binding Proteins AT2G36910 36.250 1.77e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2293 K05681 - gmx:100813462 590.497