Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2290 ATGAGTTCTCTCCTTCAATCTCATGCTAGTGACTGTGAGCAAGACAATAATAGCTCTACAATGTTGCCAACAACTGTGGAATTTGATTCCACATTTGAAGTAGAAACCGGTAAAGAGGAGGGTGTTTTCTTGACATGGGAGGACCTTTGGGTGACTGTTTCAAATGGAAACAATGGAAGAAAACCAATACTCCAAGGTCTAAAAGGCTACGCAAAACCAGGACAGCTTTTGGCCATAATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATACTTTAGCAGGAAGATTAGGCTTTAAGACGAAACAAACGGGGAAAATTCTAATCAATGGATGCAAACGACGACTAGCTTATGGAACATCTGCATATGTAACAGAAGACGATACAATTTTGAATACTCTAACAGTTAGAGAAGCTGTGCACTATTCAGCTCATCTTCAATTACCTGACACCATGTCTAAGGAAGAGAAACAAGAGAAAGCAGATTTGACAATACGAGAAATGGGTCTGCAAGATGCAGTCGACACGAGAATTGGAGGGCGGAGATCTAAAGGAGTGAGTGGTGGACAAAAAAGAAGAGTTAGCATTTGCATTGAGATCTTTACACATCCTAGACTTCTTTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCTTCTTTCCATGTTATGACTAGAATTTCTGGTTTGAACAAAAAGGATGGTATTCAAATGACTATTATTGCATCTATTCATCAACCAAGTAATGAAATTTTTCAGCTTTTTCACAACGTTTGTCTTCTGTCTTCCGGGAAAACTGTTTACTTTGGACCTGTATCTGCTGCAGATAAGTTTTTTTCATCAAATGGTTTTCCATGCCCAAGTCTCCAGAGTCCTTCTGATCACTATGTAAAAACAATTAACAATGATTTTGAACATGACCCTGAGAAAGGATTAGGTGGAGGGCTAAGCACAGATGAAGCTATTCACATGCTTGTTAAATCGTATGATTCATCTGAAATTAGTCACCAAGTTCAGAAAGAACTATCTCAAATTAATCAAAGAGTGTCATACTCAATGGAGAAGAAAAGCCATGCTGATTTTCTAACTCAGTGTCTGATTCTTACAAGAAGATCTTTCGTGAATATGTATCGCGAAGCAGGCTATTATTGGTTGCGTCTACTAATCTATGGCGCATTGGCTTTAAGTCTTGGCACCATGTTCTTCGACATTGGTTCAAGCAATCAATCCATTCAGGCAAGAGGTTCACTGCTTGTGTTTATGGTTACATTCTTGACATTCATAACTGTTGCTGGATTCCCTTCTTTTGTAGAAGATATGAAGGTATTTGAACGAGAAAGACTTAATGGACATTATGGTGCGACAGCATTTACCGTTGGAAACACATTATCTGCTGTTCCATTCTTGCTATTGATGTCATTGATACCAGGAGCATTGGTTTATTATCTAGTTGGACTTCACCAAGGACATGAACAATTTGTGTACTTTATATCTATGCTCTTCATTTGTGTCTTGTTAGTGGAAGGTCTCATGATGATTGTTGCAAGTGTGGTTCCAAATTTTCTGATGGGAATAATCTTTGGTTCTGGAATCTTGGGAGTAATGATGTTAGATGGTGGATTCTATAGGCTACCAAGTGATATACCAAAGCCATTTTGGAAATATCCTTTGCACTATATTTCCTTTCACAAATATGCATATCAAGGATTATTTAAGAATGAGTTTCAAGGTCTAACATTCACTACTAGCAATAATCAAGGGATGATTAGTGGTGATGAGATATTGAGAAACTTGTGGCAAATGGAAATTAGTTACTCAAAGTGGGTGGACTTTGCTATTTTGGTTGGAATGGCTTTGGTTTATAGAATTATGTTTTTGATTATTATCAAGAGCTTTGAGATGGTGAAGCCTATTGTTGCAGCAATTAAGTGTCCTCAAGAAAAGGTTAGGTTCACTAAAGTGACTAGGAGTAGGAGCAGTGAGATTGATTAG 1998 0.3814 MSSLLQSHASDCEQDNNSSTMLPTTVEFDSTFEVETGKEEGVFLTWEDLWVTVSNGNNGRKPILQGLKGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGFKTKQTGKILINGCKRRLAYGTSAYVTEDDTILNTLTVREAVHYSAHLQLPDTMSKEEKQEKADLTIREMGLQDAVDTRIGGRRSKGVSGGQKRRVSICIEIFTHPRLLFLDEPTSGLDSAASFHVMTRISGLNKKDGIQMTIIASIHQPSNEIFQLFHNVCLLSSGKTVYFGPVSAADKFFSSNGFPCPSLQSPSDHYVKTINNDFEHDPEKGLGGGLSTDEAIHMLVKSYDSSEISHQVQKELSQINQRVSYSMEKKSHADFLTQCLILTRRSFVNMYREAGYYWLRLLIYGALALSLGTMFFDIGSSNQSIQARGSLLVFMVTFLTFITVAGFPSFVEDMKVFERERLNGHYGATAFTVGNTLSAVPFLLLMSLIPGALVYYLVGLHQGHEQFVYFISMLFICVLLVEGLMMIVASVVPNFLMGIIFGSGILGVMMLDGGFYRLPSDIPKPFWKYPLHYISFHKYAYQGLFKNEFQGLTFTTSNNQGMISGDEILRNLWQMEISYSKWVDFAILVGMALVYRIMFLIIIKSFEMVKPIVAAIKCPQEKVRFTKVTRSRSSEID* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2290 665 Pfam ABC-2 type transporter 365 577 IPR013525 GO:0016020|GO:0140359
Psa7g2290 665 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 290 IPR003439 GO:0005524
Psa7g2290 665 MobiDBLite consensus disorder prediction 1 20 - -
Psa7g2290 665 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 34 652 - -
Psa7g2290 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 277 IPR027417 -
Psa7g2290 665 Pfam ABC-2 type transporter 247 343 IPR043926 GO:0140359
Psa7g2290 665 ProSitePatterns ABC transporters family signature. 187 201 IPR017871 GO:0005524
Psa7g2290 665 Pfam ABC transporter 66 215 IPR003439 GO:0005524
Psa7g2290 665 Gene3D - 44 304 IPR027417 -
Psa7g2290 665 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 34 652 - -
Psa7g2290 665 SMART AAA_5 73 262 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2290 Psa-Chr7 162817207 162820324 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2290 74 219 Calmodulin-binding Proteins AT2G36910 32.026 1.23e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2290 K05681 - gmx:100789571 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2290 7 162817207 162820324 Psa7g2290 7 162817207 162820324 ECH