Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2289 GGCTATGTAACACAAGATGATGCTATGCTGTCGGCTTTAACAGCTGGTGAAACTTTATACTACTCAGCTCAACTTCAATTTCCGAAGTCAATGTCCATAGCAGAGAAGAAGAGACAAGCAGATATCACACTTAAAGAAATGGGCCTGCAAGATGCTATTAACACAAGGGTCGGAGGGTATGGTTCTAAGGGCCTAAGTGGAGGCCAAAAGAGGAGACTTAGCATTTGTATTGAGATGCTAACACGCCCAAGACTTCTTTTCCTTGATGAACCAACAAGTGGACTTGATAGTACAGCTTCCTACTATGTTATGAGTAGAATTGCAAGTTTACGTGTAAGGGATGGTATTCAAAGGACAATTGTTGCATCCATCCATCAGCCTAGTAGCCAAGTTTTTGAACTATTTGATGACCTCTGTCTTCTTTCCTCTGGGGAGACGGTATATTTTGGTCCAGCTTCTGAAGCAAATCAGTTTTTTTCTTCAAATGGCTTCCCTTGCCCAACTCTCTACAATCCTTCTGATCATTACTTAAGGATCATAAACAAAGATTTTGAACAGAACACTGAAGAAGGCTTTGAATCTGAAAAAGCAATTGGTATCCTTGTAAATTCATATAAAGCATCTGAAATGAAAAGTCAAGTTCAGAGTGAAGTGACAAATATAAGTGAACTTGATTTGGGTATAATAAAGAATAGGAGGATCCACGCTCCATTTCTGACTCAGTGTATGGTTCTTATAAAAAGATCTTCCCTTCAATTGTACCGTGATATCAGCAACTACTGGTTACGTCTTGTCGTCTTTGTTGCAATATCTATAAGTCTAGGCTCTGTCTTCTATCACATCGGCTCAAGTAATGAATCTATTCAGGTCAGAGGATCGCTGATTGCATTTTTGATGCCAGTCGTGACTTTCATGACACTTGTTAGTGGATTCTCTCCCTTGATTGAGGAAATAAAGGTGTTTGAACGAGAGAGAATGAATGGGCACTATGGCATTACTGCTTTTCTCATTGGCAATATATTATCTCCTATTCCTTACATGCTAATGATCTCTCTCATTTCTGGAGTAATAGTGTGTTACCTTTCTGGACTACACAAAGGACTAGAGCAATATCTATACTTTGCTTCTATCCTATTTTTCACTATGATGTGGGTTGAGAGCCTTATGATAATAGTGTGTTACCTTTCTGGACTACACAAAGGACTAGAGCAATATCTATACTTTGCTTCTATCCTATTTTTCACTATGATGTGGGTTGAGAGCCTTATGATGGTTGTGGGGAGTATCTTCACAAATTTTGTGATAGGTGTGATCGTTGCTGGTGGAGTTCAAGGACTTACAATTTTAACAGCCGGATTCTTCCGACTTCCTGATGATCTTCCAAATCCATTATGGAAGTACCCTGGCTACTACATTTCCTTCCTGACATATGCTTTCCAAGGATCATTCAAGAATGAATTTGAAGGCTTAACATTTGTTTGGTATCAAGATGGAGGTACCATAACCGTTAGTGGTAGAGATTTCCTAACCAATACATGGCATGTGCAAATAGGTCACTCTAAGTGGGTTGATCTTGCCATCATGTTTGGAATGATTGTTGTTTATCGAGTTCTATTCTTGGTCATCATTAAGGTCAAGGAGCAGTCAAAACCTACCATAAATTAA 1665 0.3904 GYVTQDDAMLSALTAGETLYYSAQLQFPKSMSIAEKKRQADITLKEMGLQDAINTRVGGYGSKGLSGGQKRRLSICIEMLTRPRLLFLDEPTSGLDSTASYYVMSRIASLRVRDGIQRTIVASIHQPSSQVFELFDDLCLLSSGETVYFGPASEANQFFSSNGFPCPTLYNPSDHYLRIINKDFEQNTEEGFESEKAIGILVNSYKASEMKSQVQSEVTNISELDLGIIKNRRIHAPFLTQCMVLIKRSSLQLYRDISNYWLRLVVFVAISISLGSVFYHIGSSNESIQVRGSLIAFLMPVVTFMTLVSGFSPLIEEIKVFERERMNGHYGITAFLIGNILSPIPYMLMISLISGVIVCYLSGLHKGLEQYLYFASILFFTMMWVESLMIIVCYLSGLHKGLEQYLYFASILFFTMMWVESLMMVVGSIFTNFVIGVIVAGGVQGLTILTAGFFRLPDDLPNPLWKYPGYYISFLTYAFQGSFKNEFEGLTFVWYQDGGTITVSGRDFLTNTWHVQIGHSKWVDLAIMFGMIVVYRVLFLVIIKVKEQSKPTIN* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2289 554 Pfam ABC-2 type transporter 240 395 IPR013525 GO:0016020|GO:0140359
Psa7g2289 554 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 160 IPR027417 -
Psa7g2289 554 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 391 553 - -
Psa7g2289 554 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 392 - -
Psa7g2289 554 Gene3D - 1 161 IPR027417 -
Psa7g2289 554 Pfam ABC transporter 1 93 IPR003439 GO:0005524
Psa7g2289 554 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 1 392 - -
Psa7g2289 554 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 391 553 - -
Psa7g2289 554 Pfam ABC-2 type transporter 125 214 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2289 Psa-Chr7 162805747 162808529 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2289 31 103 Calmodulin-binding Proteins AT2G36910 42.466 3.70e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2289 K05681 - gmx:100790102 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2289 7 162805747 162808529 Psa7g2289 7 162805747 162808529 ECH