Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2286 ATGGTCGGTATAACTGATCACAACGGTAAACAAATAATGTTATCTGATAGTGAAGATGATGATCTTCCAGCAACCCCTCAAAGAAGAATAAGAGCACTTGTTGTGGACACTGACGACCACCTTCGAGAGATTCATGCAGATATGTTGAAAAGACTTGGTGTGGAAACTCGTTCAGTGAAAACTGGCCAAGAAGCTCTAGAAATAATTCGTAACGATGAAATCTATGACTTAATTCTCCTTGCTAGGCATTTTCCTGTCATTGATGGGGTTCAGGTGACGAAGATGCTGCGGGACATGGAGTACCCTGCAACGATTGTTGGGGTGACGCGTCGCCTTACAGAATCACAATGGGAAGAATTTTTTAGTGCAGGGCTAGATGATTGCATTGATTACGAGACACCTGTGAGCGCGAAAACGCTTGCATTCGTTGTTGAAACTACTCCCCGTCGCCAAACCTGGAAGCTAAGAAATGTTTATAGTACAGTTTACCAATCTTTTCTCGGTCCTCGTCCAGCTTCTGGTTCTGGTTCTGGTTCTGGTTCAAGTTCTACTTCTGGAAAAGTTTCTAGAAAAGATTAA 579 0.4301 MVGITDHNGKQIMLSDSEDDDLPATPQRRIRALVVDTDDHLREIHADMLKRLGVETRSVKTGQEALEIIRNDEIYDLILLARHFPVIDGVQVTKMLRDMEYPATIVGVTRRLTESQWEEFFSAGLDDCIDYETPVSAKTLAFVVETTPRRQTWKLRNVYSTVYQSFLGPRPASGSGSGSGSSSTSGKVSRKD* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2286 192 ProSiteProfiles Response regulatory domain profile. 31 146 IPR001789 GO:0000160
Psa7g2286 192 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 144 - -
Psa7g2286 192 MobiDBLite consensus disorder prediction 170 192 - -
Psa7g2286 192 SMART REC_2 30 144 IPR001789 GO:0000160
Psa7g2286 192 MobiDBLite consensus disorder prediction 170 186 - -
Psa7g2286 192 Gene3D - 23 150 - -
Psa7g2286 192 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 23 144 - -
Psa7g2286 192 MobiDBLite consensus disorder prediction 1 21 - -
Psa7g2286 192 SUPERFAMILY CheY-like 29 156 IPR011006 -
Psa7g2286 192 CDD REC_hyHK_CKI1_RcsC-like 33 140 - -
Psa7g2286 192 Pfam Response regulator receiver domain 33 129 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2286 Psa-Chr7 162774623 162775994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2286 27 130 Response Regulator Gene Family AT3G04280 36.792 2.35e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa7g2286 Response_reg 7.1e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2286 - K07679 cam:101493171 127.872