Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2285 ATGGGTGGTAGTGAAGGAGAAAAGGGTGGCATTACTGTGACATGGGAAAATTTGGAGGCCATTGTTACAAATGGAAAGAATAGAAAACTAATTCTGCAGGGACTTACAGGTTATGCTCAGCCAGGGAAGCTTTTGGCTGTGATGGGTCCTTCAGGCAGTGGCAAATCAACACTTCTTGATGCTTTAGCAGGAAGGTTGAAATCAAACATACAGCAATCGGGGAAGATTCTAATCAATGGCAAAAAACAAACACTGGCTTATGGAACATCAGGCTATGTAACACAAGATGATGCTATGCCAGCAACTTTAACAGCTAGTGAAACTTTATACTACTCAGCTCAACTTCAATTTCCAAACACAATGTCCATAGCAGAGAAGAAGAGACAGGCAGATATCACACTTAAAGAAATGGGCCTGCAAGATGCTATTAACACAAGGGTTGGAGGGTATGGTTCTAAGGGCCTAAGTGGAGGCCAAAAGAGGAGACTAAGCATTTGCATTGAGATTCTAACACACCCTAGACTTCTTTTCCTTGACGAACCAACAAGTGGACTTGATAGTGCTGCTTCCTACTATGTTATGAGTAGAATTGCAAGTTTAAGTCTAAGGGATGATATTCAAAGGACAATTGTCGTATCCATCCATCAGCCTTGTAGTGAAGTTTTTGAACTGTTCCATGACCTCTGTCTTCTTTCCTCCGGGGAGACGGTATATTTTGGTCCAGCTTCTGAAGCAAATCAGTTTTTTGCTTCAAATGGTTTCCCTTGCCCAACTCTCTATAATCCTTCTGATCACTACTTACGGATCATAAACAAAGATTTTGAACAGGACATTGAAGAAGGTTTTGGGAAGGGAGTTATTACTGAAGAAGCAATTGGTATCCTTGTAAAATCTTATAAGGCTTCAGAAATAAAAAGTCAAGTTCAGATTGAAGTGACAAAAATAAGTGAACGTGATTTGGGTGCAATAAGGAATAGGAGGACCCACGCTCCATTTCTGACTCAGTGTATGGTTCTTATAAAAAGATCTTCCCTGCAACTGTACCGTGACACCAGCAACTACTGGTTACGTCTTGTTGTCTTTATTGCAATAGCTATAAGCTTGGGCTCTATCTTCCATCACGTTGGCTCAAGTAATCGATCTATTCAGGTCAGAGGATCGCTACTTTCATTTTTTATGTCAGTCCTGACTTTCATGACACTTGTTGGTGGATTCTCTCCCTTGATTGAGGAAATGAAGGTGTTTGAACGAGAGAGATTGAATGGGCACTATGGTATTACTGCTTTTCTCATTGGCAACACATTATCTCCTATACCTTACATGACAATGATCTCTCTCATTTCTGGAGTAATAGTGTGTTACCTTTCTGGACTACACAAAGGACTAGAGCAATATCTATACTTTGCTTCTGTCCTATTTTTCACTATGATGTGGGTTGAGAGCCTTATGATGGTTGTGGGGAGTATCTTCCCAAATTACGTGATGGGTGTGATCGTTGCTGCTGGAATTCAAGGACTTACAATTTTAACAGCCGGATTCTATCAACTTCCTAATGATCTTCCAAATATATTATGGAAGTATCCTTGCTACTACATTTCCTTCCTAGCATATGCTTTCCAAGGATCATTCAAGAATGAATTCGAAGGCTTAACATTTGTTTGGTATCAAGATGGAGGTACCATAACCGTTAGTGGTAGAGATTTCCTAACCAATACATTGCATGTGCAAATGGGTCACTCTAAGTGGGTTGATCTTGCCATCATGTTTGGAATGATTGTTGTTTATCGAATTCTATTCTTGATCATCATTAAAGTCAAAGAGCAGTCAAAACCTACTCTTCCTACCATAAATGAATGGTCCCCAAGCAAAAACATGATGTAG 1881 0.3998 MGGSEGEKGGITVTWENLEAIVTNGKNRKLILQGLTGYAQPGKLLAVMGPSGSGKSTLLDALAGRLKSNIQQSGKILINGKKQTLAYGTSGYVTQDDAMPATLTASETLYYSAQLQFPNTMSIAEKKRQADITLKEMGLQDAINTRVGGYGSKGLSGGQKRRLSICIEILTHPRLLFLDEPTSGLDSAASYYVMSRIASLSLRDDIQRTIVVSIHQPCSEVFELFHDLCLLSSGETVYFGPASEANQFFASNGFPCPTLYNPSDHYLRIINKDFEQDIEEGFGKGVITEEAIGILVKSYKASEIKSQVQIEVTKISERDLGAIRNRRTHAPFLTQCMVLIKRSSLQLYRDTSNYWLRLVVFIAIAISLGSIFHHVGSSNRSIQVRGSLLSFFMSVLTFMTLVGGFSPLIEEMKVFERERLNGHYGITAFLIGNTLSPIPYMTMISLISGVIVCYLSGLHKGLEQYLYFASVLFFTMMWVESLMMVVGSIFPNYVMGVIVAAGIQGLTILTAGFYQLPNDLPNILWKYPCYYISFLAYAFQGSFKNEFEGLTFVWYQDGGTITVSGRDFLTNTLHVQMGHSKWVDLAIMFGMIVVYRILFLIIIKVKEQSKPTLPTINEWSPSKNMM* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2285 626 Gene3D - 10 252 IPR027417 -
Psa7g2285 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 249 IPR027417 -
Psa7g2285 626 Pfam ABC-2 type transporter 215 271 IPR043926 GO:0140359
Psa7g2285 626 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524
Psa7g2285 626 Pfam ABC-2 type transporter 334 547 IPR013525 GO:0016020|GO:0140359
Psa7g2285 626 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 7 617 - -
Psa7g2285 626 SMART AAA_5 41 243 IPR003593 -
Psa7g2285 626 Pfam ABC transporter 33 183 IPR003439 GO:0005524
Psa7g2285 626 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 258 IPR003439 GO:0005524
Psa7g2285 626 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 7 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2285 Psa-Chr7 162689083 162711064 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2285 31 219 Calmodulin-binding Proteins AT2G36910 29.000 1.21e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2285 K05681 - gmx:100790102 923.309