Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2277 ATGGATAGTTTCTGTTGCTTCAGCTCTGTCAGTCAGGCGGTTGGAGGGCGTTCGTCAAGCAACTCTGGCAAAGGTAAAGGCAGTCAGTCGCCGGTCAAATATGGATTTAGCCTTGTTAAAGGGAAAGCCAACCATCCAATGGAGGACTATCATGTAGCGAAATTTGTCCATTTCAAAGGACAAGAGCTAGGACTATTTGCCATATACGATGGACACCTCGGAGACAGTGTACCGTCATATCTGCAAAAGTATCTCTTTTCTAATATCTTGAAGGAAGACGATTTCTGGAACGATCCATTCATGTCGATTTCTAAAGCTTACGAGTCAACAGATCAGGCGATTCTTTCTCACAGTCCTGATTTGGGGCGAGGAGGATCAACCGCCGTGACTGCAATTCTCATAAATAATCAGAAACTCTGGGTCGCCAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGGAAGGTGTAGCTGTACAGATGACTACCGATCATGAACCTAATACGGAACGTGGCAGTATTGAGAATAGAGGCGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCGGTTTCTCGAGCATTTGGAGACAAAAACCTCAAAACGCACTTGCGATCTGACCCCGACATTCAGTATGCTGATGTTAACCAAGATACCGAGCTTTTGATTCTTGCTAGTGATGGTCTATGGAAGGTAATGGCGAATCAAGAAGCGGTCGATATCGCGAAAAGAATAAAGGATCCACAAAAGGCAGCTAAACAACTAGCTACCGAGGCATTGAACAGAGACAGTAAGGATGATATTTCCTGCGTTGTAGTTCGTTTCAAGGGATGA 849 0.4523 MDSFCCFSSVSQAVGGRSSSNSGKGKGSQSPVKYGFSLVKGKANHPMEDYHVAKFVHFKGQELGLFAIYDGHLGDSVPSYLQKYLFSNILKEDDFWNDPFMSISKAYESTDQAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSREGVAVQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADVNQDTELLILASDGLWKVMANQEAVDIAKRIKDPQKAAKQLATEALNRDSKDDISCVVVRFKG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2277 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Psa7g2277 282 SMART PP2C_4 29 278 IPR001932 -
Psa7g2277 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Psa7g2277 282 Gene3D - 15 282 IPR036457 -
Psa7g2277 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Psa7g2277 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Psa7g2277 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Psa7g2277 282 CDD PP2Cc 32 280 IPR001932 -
Psa7g2277 282 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2277 Psa-Chr7 162124680 162127696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2277 1 281 PP2C-type Phosphatase Gene Family AT1G22280 72.474 3.21e-151 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2277 K17506 - gmx:100801722 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2277 7 162124680 162127696 Psa1g4952 1 365551739 365554719 PCT