Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2257 ATGAACAGCTTAGTTGGTCTTGGGGCTTTGTCATCATTCACAGTCAGTTCATTTGCTGTTTTACTGCCGAAATTGGGTTGGAAGGCGTTTTTTGAGGAACCTATCATGCTGATTGCATTTGTCTTGTTGGGAAGGAATCTTGAACAGAGAGCTAAGATTAAAGCAACCAGTGATATGACAGGACTTCTTAGCATATTGCCATCTAAAGCTCGCCTTCTAGTTAATAATGGGGAAACAGAAGTTGCCTCAGTTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGAAGACCAAATTATCATATTACCCGGAGATCGTATTCCAGCTGATGGAATTGTGAGGGCTGGTAGAAGTACTGTAGACGAGTCAAGTTTCACTGGGGAGCCGCTTCCAGTAACAAAAGAACATGGGAGTGAGGTTGCAGCTGGAAGTATAAATCTAAATGGAACTCTTACAATAGAGGTGCGGAGACCAGGTGGTGAGACTGCTATAGGAGACATTATTCGTCTAGTTGAAGAGGCACAAAGCAGAGAGGCTCCAGTACAACGGTTGGCTGACAAGGTAGCAGGATACTTCACATATGGAGTAATGGGAATTTCTGTTACCACGTTTACGTTTTGGAGTATGTTTGGCTCACAACTTATACCTTCTGCTGTATATCAAGGAAGTGCAGTTTCACTGGCTTTGCAGCTTGCATGTAGTGTTCTGGTTATTGCTTGTCCATGTGCACTTGGGTTAGCTACGCCTACTGCTGTGCTGGTTGGAACTTCTCTGGGGGCTAAAAGAGGATTACTTTTGCGTGGTGGAAATATTCTAGAGAAGTTTGCCATGGTAAACACTGTTGTGTTTGACAAAACAGGGACCCTCACGATTGGTAAACCCGTTGTGACAAAGATTGTCACTCCCACATGCATAGAAAATGCAAATTCAAGCCAAACTAAAATAAATGCTTTGTCTGATATTGAAGTTCTGAGGTTAGCAGCTGCTGTAGAATCTAATTCAGTACATCCAGTTGGGAAAGCAGTTGTGGCTGCTGCTCAGGCAGTTAATTGTCATGACGCCAAGGTAGTAGATGAAACATTCCTGGAAGAACCTGGATCCGGTGTTGTTGCAATTGTAAATAACAAAAAGGTTTCGGTTGGGACATTGGAATGGATAACCAGACATGGAGTTAACAACAGTATACATCAAGAAGTGGAGTATAAAAATCAATCATGTGTCTATGTTGGAGTTGACGATACTTTGGCTGGCCAGATTTATTTTGAAGATGAGATAAGGAAAGATGCAAGACATGTCATTGACACGTTATCTAAGCAAGATATTGGTGTCTACATGCTGTCTGGAGACAAGAGAAATGCAGCTGAATATGTTGCATCTCTTGTTGGGATTCCCAAAGCAAAGGTGCTATCTGAAGTGAAACCAGAGGAGAAAAACAACTTCATAAAGGAACTTCAAAAAGATAAGAAAGTTGTAGCTATGGTTGGTGATGGAATTAACGATGCAGCTGCCCTGGCTTCTTCACATATAGGTATTGCATTGGGTGGTGGTGTTGGAGCTGCCAGTGAAGTGTCTTCTATTGTATTGATGCACAACCATCTCTCACAGCTGCTTGATGCCTTGGAGCTTAGCAGGCTAACCATGAATACTGTAAAGCAAAATCTATGGTGGGCTTTTGTATACAATATTGTAGGGATTCCAATTGCAGCTGGAGTGCTATTTCCTTTAAATGGTACCATGCTGACTCCATCAATTGCAGGTGCTCTCATGGGGTTGAGTTCCATCGGCGTAATGACTAACTCATTACTTTTGAGATTCAAGTTTTCCTTAAAACAAAAACAAATACATGGCACATCGCCAAAGACCAAAACCTATGTTGAATCTGATCTGGCTCTCCGAAACAAGAAAATAAAGTACCCAAATTAG 1920 0.4188 MNSLVGLGALSSFTVSSFAVLLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVNNGETEVASVVEVPSDSLSVEDQIIILPGDRIPADGIVRAGRSTVDESSFTGEPLPVTKEHGSEVAAGSINLNGTLTIEVRRPGGETAIGDIIRLVEEAQSREAPVQRLADKVAGYFTYGVMGISVTTFTFWSMFGSQLIPSAVYQGSAVSLALQLACSVLVIACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGKPVVTKIVTPTCIENANSSQTKINALSDIEVLRLAAAVESNSVHPVGKAVVAAAQAVNCHDAKVVDETFLEEPGSGVVAIVNNKKVSVGTLEWITRHGVNNSIHQEVEYKNQSCVYVGVDDTLAGQIYFEDEIRKDARHVIDTLSKQDIGVYMLSGDKRNAAEYVASLVGIPKAKVLSEVKPEEKNNFIKELQKDKKVVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMHNHLSQLLDALELSRLTMNTVKQNLWWAFVYNIVGIPIAAGVLFPLNGTMLTPSIAGALMGLSSIGVMTNSLLLRFKFSLKQKQIHGTSPKTKTYVESDLALRNKKIKYPN* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2257 639 ProSitePatterns E1-E2 ATPases phosphorylation site. 283 289 IPR018303 -
Psa7g2257 639 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 1 603 - -
Psa7g2257 639 Gene3D - 292 424 IPR023299 GO:0000166
Psa7g2257 639 SFLD p-type atpase 264 543 IPR044492 -
Psa7g2257 639 Pfam E1-E2 ATPase 65 261 - -
Psa7g2257 639 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 330 572 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g2257 639 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 74 302 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g2257 639 PRINTS P-type cation-transporting ATPase superfamily signature 120 134 - -
Psa7g2257 639 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Psa7g2257 639 PRINTS P-type cation-transporting ATPase superfamily signature 438 448 - -
Psa7g2257 639 PRINTS P-type cation-transporting ATPase superfamily signature 493 512 - -
Psa7g2257 639 PRINTS P-type cation-transporting ATPase superfamily signature 516 528 - -
Psa7g2257 639 Gene3D - 51 174 - -
Psa7g2257 639 PANTHER ATP7, ISOFORM B 1 604 - -
Psa7g2257 639 SUPERFAMILY HAD-like 279 599 IPR036412 -
Psa7g2257 639 Pfam haloacid dehalogenase-like hydrolase 277 505 - -
Psa7g2257 639 PRINTS H+-transporting ATPase (proton pump) signature 465 481 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g2257 639 PRINTS H+-transporting ATPase (proton pump) signature 493 509 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g2257 639 PRINTS H+-transporting ATPase (proton pump) signature 524 549 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g2257 639 Gene3D - 272 543 IPR023214 -
Psa7g2257 639 SFLD Haloacid Dehalogenase 264 543 - -
Psa7g2257 639 SUPERFAMILY Calcium ATPase, transmembrane domain M 35 581 IPR023298 -
Psa7g2257 639 SUPERFAMILY Calcium ATPase, transduction domain A 84 170 IPR008250 -
Psa7g2257 639 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 1 602 IPR027256 GO:0006812|GO:0016021|GO:0019829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2257 Psa-Chr7 161082036 161098404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2257 1 603 Primary Pumps ATPases AT1G63440 39.776 8.09e-126 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2257 K17686 - gmx:100796210 1035.4