Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2256 ATGGATTCTGCGGTCTCCGTCACCACGACGGCGCAGATGGTACTTTTCAGAGCACTCCACCGTCATTTATCCAGAGCACCACATCGCTCGCTCCTCCGCCGAAAACTTAAATGCGCCGTTACTTCCTACAACAATCGCTTCCGTATACCGTGTTCCTCCACTTCTGTTCCGTTATCGCCCTCGCTCTATACCTTCCACGCGCTGCTCTCACGAACGCCGTGCCGCACTCGCTGCCTTTCGAGCTCAGCTGCTTCATTTGCTTCTTCCGGTGGCAGTGGAAATGGAGGCGCTGGAGCCGGAAATGGAGGAGGAGGTGGCGGTTCTGGTGGCGAGTTTGGAGATGCTAGCATCAAATTGATTGGAGATACGGCTCAAGAGCTTTCAACTCTTTCACCCGATGCTATTATTCTTGATGTTTCGGGAATGGTATGCGGAGGATGTGCAGCGTCTGTGAAAAGGATTCTGGAAAGTCAACCACAAGTCTCATCTGTTAGTGGAAGACACTTGCAGAACATTTAA 519 0.5183 MDSAVSVTTTAQMVLFRALHRHLSRAPHRSLLRRKLKCAVTSYNNRFRIPCSSTSVPLSPSLYTFHALLSRTPCRTRCLSSSAASFASSGGSGNGGAGAGNGGGGGGSGGEFGDASIKLIGDTAQELSTLSPDAIILDVSGMVCGGCAASVKRILESQPQVSSVSGRHLQNI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2256 172 Gene3D - 134 171 - -
Psa7g2256 172 ProSiteProfiles Heavy-metal-associated domain profile. 134 165 IPR006121 GO:0046872
Psa7g2256 172 Pfam Heavy-metal-associated domain 137 165 IPR006121 GO:0046872
Psa7g2256 172 SUPERFAMILY HMA, heavy metal-associated domain 135 165 IPR036163 GO:0046872
Psa7g2256 172 CDD HMA 137 165 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2256 Psa-Chr7 161069314 161070462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2256 118 165 Primary Pumps ATPases AT4G33520 62.500 5.60e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2256 K17686 - vra:106773839 184.111