Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2237 ATGGAGAACGCGATGAGCAACGGCAAGATGAAGGTCTCGAAGCTGAGGACTTTGAACGAGAACTTTTCGCCGTTGCAGATCGAGTTGGATGAAAAGAGAGGACGCTATCTCCAATCAGCGACGATGAGTCCAGGTTTTCAACAGTACACCGAGAAATTCGACGCTGGCTCGCCGCTCGCAAAATACTTCTACGCCGGATCTCCGATTTCATCTAAATCCGGTGAGGCCTTCAATTCTCCGCTTTTCGGCTCCAGCAAGTATAGGTCCGCAAACAGTAGCTTTGGTTCAGGGAACAGTAGCTTTGGTTCTCGCGGTAGATTGTCTCTCTCCCCGCTTTCTTCAATCGAGAACTTCGAATTGAAGCCAATGCAGAAGTCGCCGCCGATATACCGAACGCCGGTGAAGGCGGAGGAGGAAGTTATTGTGATGGATGATATTCAGGTGAGGCCAATGTTCGGAGTAAAGAGCGGAAGGTCCTCATCGTCTTCTTCCAGTAGGGGCTCTTCTTCCTCTTCTTCGTCCACCAAGAGTTTGTTCAAGACGGACATTTGCAGAGCCTGGGAAGAATCTGGAAACTGCCGCTTCAATTCCAAATGCCAGTTTGCTCACGTCAGAGAAGAGCTTCATCCAGGTCGTTTCTCCATGAAGAATAAATCTGAGGCACAGATGGGCAAAATTTCAATTAGACAAGAACCGTGCATATATGGCCTAAATACACGCATTGTTCAAGAACATCAAGAAGTAGCTGAACCTGAACGTGTAGTCACAAGACCCATGATATCACAACCATCTTCACCTGAACATCATCGCATGCACGCCAATTCCAACACCATCAGTGACTGGTCACCTCTGGATGATGGCATTGAGTGTTTCCTCCCAAATTGTTCAGATAAAGTTCCCTCTAAGGAGGAAGTTGATGCACATATTTTTGGTATTCTTAATCAGCCGACTACTAAAAGAAGACTACCGGTATTCGCGGCACTTTGCTAG 990 0.4737 MENAMSNGKMKVSKLRTLNENFSPLQIELDEKRGRYLQSATMSPGFQQYTEKFDAGSPLAKYFYAGSPISSKSGEAFNSPLFGSSKYRSANSSFGSGNSSFGSRGRLSLSPLSSIENFELKPMQKSPPIYRTPVKAEEEVIVMDDIQVRPMFGVKSGRSSSSSSSRGSSSSSSSTKSLFKTDICRAWEESGNCRFNSKCQFAHVREELHPGRFSMKNKSEAQMGKISIRQEPCIYGLNTRIVQEHQEVAEPERVVTRPMISQPSSPEHHRMHANSNTISDWSPLDDGIECFLPNCSDKVPSKEEVDAHIFGILNQPTTKRRLPVFAALC* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2237 329 PANTHER CCCH ZINC FINGER/TIS11-RELATED 6 327 IPR045877 GO:0003729
Psa7g2237 329 Gene3D - 170 210 - -
Psa7g2237 329 SUPERFAMILY CCCH zinc finger 177 209 IPR036855 GO:0046872
Psa7g2237 329 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 179 204 IPR000571 GO:0046872
Psa7g2237 329 MobiDBLite consensus disorder prediction 154 174 - -
Psa7g2237 329 PANTHER ZINC FINGER C-X8-C-X5-C-X3-H TYPE PROTEIN 6 327 - -
Psa7g2237 329 ProSiteProfiles Zinc finger C3H1-type profile. 178 206 IPR000571 GO:0046872
Psa7g2237 329 MobiDBLite consensus disorder prediction 153 174 - -
Psa7g2237 329 SMART c3hfinal6 178 205 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Psa7g2237 zf-CCCH 2.7e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2237 K18753 - gmx:102665928 259.225