Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2229 ATGATTTATCTCTTAGAATTGAACTTCTATTCATTTGTTCAAACTTTACCTTATTTTTCTTCTCTTTGGTTCTTCCTGTTGTTACCAATGGCTGTTAGTACAATCTGCGATTCTGAATCACTCAACCATGTAGTCACGAATCCAAATCCCCCAAAAGAAATAGATGGAAAAAAAATAATCCAGGTCACTGAAACTAACAACAGCAACAACACTGATATTAATTATTGGCAACGGGCGCAATGGCTTCGCGCCGCGGTATTAGGAGCTAACGACGGATTAGTTTCCGTTGCGTCACTAATGATGGGCGTCGGCGCTGTTAAAAAGGACATCACAGCAATGTTGGTAGCCGGTTTCGCAGGGTTAGTCGCGGGAGCATGTGGTATGGGAATAGGAGAGTTTGTTTCTGTTTACACACAATATGAAGTTGAAGTAGGTCAAATGATGAGAGAGATAGGAACAAGTGATAGATCAGAGAAAAAACTTGAGAATGAGTTGGAGAAGAGGAAATCGTTGCCTAATCCAATGCAAGCTGCTTCGGCTTCTGCGTTTTCGTTTTCGATTGGCGGTTTGGTTCCTTTGCTTTGTGGTTCATTTATAAGTGATTATAAGATTAGGGTTATTGTGATGATTGCAATATCAAGTTTTGCTTTGGTGGTTTTTGGAAGAGTTGGTGCCGTGCTTGGTAAGACACCAAAGATGAAAGCTTCTGTTAGGTTTCTTCTTGGTGGATGGATGGCTATGGCTATCACTTTTGGGTTAACTAAATTACTTGCACATTGTAGTGGTTTGGATTTGAATATCTAA 804 0.4017 MIYLLELNFYSFVQTLPYFSSLWFFLLLPMAVSTICDSESLNHVVTNPNPPKEIDGKKIIQVTETNNSNNTDINYWQRAQWLRAAVLGANDGLVSVASLMMGVGAVKKDITAMLVAGFAGLVAGACGMGIGEFVSVYTQYEVEVGQMMREIGTSDRSEKKLENELEKRKSLPNPMQAASASAFSFSIGGLVPLLCGSFISDYKIRVIVMIAISSFALVVFGRVGAVLGKTPKMKASVRFLLGGWMAMAITFGLTKLLAHCSGLDLNI* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2229 267 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 30 258 - -
Psa7g2229 267 Pfam VIT family 158 254 IPR008217 GO:0005384|GO:0030026
Psa7g2229 267 Pfam VIT family 82 165 IPR008217 GO:0005384|GO:0030026
Psa7g2229 267 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 258 IPR008217 GO:0005384|GO:0030026
Psa7g2229 267 CDD Nodulin-21 80 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2229 Psa-Chr7 159888881 159890408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2229 64 257 Nodulin-like Gene Family AT3G43660 57.143 1.90e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2229 K22736 - gmx:100791523 259.61