Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2228 ATGGCCTCCAACCTTGAACCAAAAACTAATGGAATCTCAGCGAACAATTTTGATATTGAGATACCTATCCATGCAAATAAAGAAAGTGTTGAAAACGAGAGTAACATTAATTATTTTCAAAGGGCACAGTGGCTTAGAGCAGCCATGTTGGGAGCCAATGATGGATTAATCACTGTTGCCTCAATGATGATTGGTATCGGAGCTATAAAAGAAGACATCAGTGTAATGATCCTTACTGGTTTTGCCGGTTTAGTAGCTGGTGCTTGTAGCATGGGTATTGGTGAGTTTGTCTCTGTGTATACTCAATACGACATAGAGATAGCTCAAATGAAAAGAGAAAGGGAAGCTAATAATAATAATAATGGAGTAGTTGATGATGAAAGTACTGAAAGGGAGAAATTGCCGAATCCGTTTCAAGCTGCGTTGGCGTCCGCACTGGCATTTTCTGTTGGTGCTGTTATGCCATTGCTAGCAGCTTCATTTATAAAGAATCATAAGATGAGGATGGGTGTTGTTGGTGCTGTTGTTAGCATGGCACTTTTGGTGTTTGGAGGAGTTGGAGCATTGGTTGGAAAAACTCCAGTGATGAGGTCTTGTGTTAGGGTTCTTATTGGTGGTTGGATGGCTATGGCCATTACATTTGGTTTCACCAAATTGATTGGAACTACTGGACTTTGA 678 0.4056 MASNLEPKTNGISANNFDIEIPIHANKESVENESNINYFQRAQWLRAAMLGANDGLITVASMMIGIGAIKEDISVMILTGFAGLVAGACSMGIGEFVSVYTQYDIEIAQMKREREANNNNNGVVDDESTEREKLPNPFQAALASALAFSVGAVMPLLAASFIKNHKMRMGVVGAVVSMALLVFGGVGALVGKTPVMRSCVRVLIGGWMAMAITFGFTKLIGTTGL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2228 225 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 222 IPR008217 GO:0005384|GO:0030026
Psa7g2228 225 Pfam VIT family 130 217 IPR008217 GO:0005384|GO:0030026
Psa7g2228 225 Pfam VIT family 45 122 IPR008217 GO:0005384|GO:0030026
Psa7g2228 225 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 222 - -
Psa7g2228 225 Coils Coil 100 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2228 Psa-Chr7 159823314 159824410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2228 31 225 Nodulin-like Gene Family AT3G43660 62.564 5.12e-91 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2228 K22736 - gmx:100802489 301.597