Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2204 ATGAAGAGCATAAGTAGTATATGGCAGGGAGTGAAACCAGAAGTGTTGATGGTGTTTGTACAACTTGCAACGGGGGCGATGAATATAATATGCAAACTTGCAATAAATGATGGAATGAGCATGAGAGTTGCCACGGTTTATCGCCTCATCTGTGCAGCGGCTTTCAATATCCCAATTGCTCTTTTCTTTGATAGGAAGAATAGAGCAAAGATAACATGGAGTGTGCTTTCTAAGGCATTTCTATGTGGATTGTTTGGGGGAAGTTTGTATTTAAACCTTTACCTTGAGGCTCTCGCTTTGACGTCAGCAACATTTATGTTGGTTATCTTCAACTTAATTCCGGCCATTACCTTCATCATGGCCGTATGTTTCGGAATGGATAAATTCAATTTGAGATTAGCGGAAGGAAAGGCGAAGGTGATAGGAACAATAATGGGAATGAGTGGTGCAATGTTGATGATTTTTTTCAAAGCTGCTCTTTCTCTATGTGGCTTATCATTCAGGCTAAGTTACACAAGGAATTCCCCTAGGAAACAAACTCAGGATTCACACTCAAGTGCAGCTTTAATGGTTTCAATGGGAGCCATTCAAGCAATTGTTATTTCTCTTTGTTTTGAAAGAGATTGGAACCAATGGAAGCTAGGAAACAAACTCAGGATTCTTACTGTTGTTTACCCGGGAATTGTAGTCTCTGGATTAGCAGTTATCATTGTTGCCTGGTGCATAAGGGCAAGGGGACCTCTATTTGCGTCTAGTTTCAATCCTTTACAACTCCTACTTGTCGTTATAGCTGCTTATTTGATGTTGGATGAGAAACTATATTTGGGAAGCATGCTTGGAGCAATTGTGATTGTGTGCGGTCTTTATACGGTACTATGGGGTCAAGGAAGAGAAATGAAAAATAAAATGAAAATGCTAGAAACCGCAAGAATGCCCGAAAATGATGAGGCTGTTGTTGTTTCCATGCCTCTTCCGTCTGAAAGAGTCATCCAAACCTACGAGGGTTCAGCCATTACTAAAGAGAATGTTGTTAATGATCAATGA 1044 0.4023 MKSISSIWQGVKPEVLMVFVQLATGAMNIICKLAINDGMSMRVATVYRLICAAAFNIPIALFFDRKNRAKITWSVLSKAFLCGLFGGSLYLNLYLEALALTSATFMLVIFNLIPAITFIMAVCFGMDKFNLRLAEGKAKVIGTIMGMSGAMLMIFFKAALSLCGLSFRLSYTRNSPRKQTQDSHSSAALMVSMGAIQAIVISLCFERDWNQWKLGNKLRILTVVYPGIVVSGLAVIIVAWCIRARGPLFASSFNPLQLLLVVIAAYLMLDEKLYLGSMLGAIVIVCGLYTVLWGQGREMKNKMKMLETARMPENDEAVVVSMPLPSERVIQTYEGSAITKENVVNDQ* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2204 347 PANTHER WAT1-RELATED PROTEIN 182 315 IPR030184 GO:0016021|GO:0022857
Psa7g2204 347 PANTHER WAT1-RELATED PROTEIN 8 163 IPR030184 GO:0016021|GO:0022857
Psa7g2204 347 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020|GO:0016021
Psa7g2204 347 Pfam EamA-like transporter family 185 292 IPR000620 GO:0016020|GO:0016021
Psa7g2204 347 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 8 163 - -
Psa7g2204 347 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 182 315 - -
Psa7g2204 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Psa7g2204 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 199 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2204 Psa-Chr7 157758679 157762019 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2204 1 317 Nodulin-like Gene Family AT1G68170 36.313 6.93e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2204 - - gsj:114424758 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g5012 1 367790402 367793440 Psa7g2204 7 157758679 157762019 PCT