Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2171 ATGGAACAGTATGAGAAGGTTGAGAAAATAGGAGAAGGTACATACGGTGTGGTGTACAAGGCTAGGGACCGTGTTACCAATGAGACCATTGCTTTGAAGAAGATTCGACTCGAACAGGAAGATGAGGGGGTTCCTAGCACTGCCATAAGAGAGATTTCTCTTTTGAAAGAAATGCAGCATCGGAACATTGTTAGGTTGCAGGATGTTGTGCATAGTGAGAAGCGATTGTATCTTGTTTTTGAGTACCTTGACTTAGATCTAAAGAAGCATATGGATTCATCTCCGGAATTTTCCAAAGATCAACGTCAAGTAAAAATGTTCCTCTATCAAATTCTCTGTGGCATTGCTTACTGTCATTCTCATAGAGTTCTTCACCGAGACCTGAAACCACAAAATCTGTTGATAGATCGCAGCTCTAATGCGCTAAAGCTTGCAGATTTTGGATTGGCTAGAGCATTTGGAATTCCTGTTAGGACATTTACACATGAGGTGGTGACACTATGGTACAGAGCTCCAGAAATATTGCTTGGGTCCCGTCATTATTCTACCCCAGTTGATGTTTGGTCAGTGGGATGCATATTTGCAGAGATGATAAACCAGCGACCACTTTTCCCTGGGGATTCTGAGATTGATGAATTGTTTAAAATATTCAGAATCACGGGTACACCAAATGAAGATACATGGCCTGGAGTGACTTCATTGCCTGATTTTAAATCAGCCTTTCCCAAGTGGCCATCTAAGGACCTGGCAACTCTGGTCCCAAGTCTTGAGCCATCTGGTCTTGATCTGTTATCTAGTATGCTTCGCTTGGATCCCAGCAGAAGAATTACTGCCAGGGGCGCTCTTGAGCACGAATACTTCAAAGACATTAAATTTGTCCCCTGA 885 0.4282 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKDQRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSSNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMINQRPLFPGDSEIDELFKIFRITGTPNEDTWPGVTSLPDFKSAFPKWPSKDLATLVPSLEPSGLDLLSSMLRLDPSRRITARGALEHEYFKDIKFVP* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2171 294 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Psa7g2171 294 ProSiteProfiles Protein kinase domain profile. 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2171 294 PANTHER CELL DIVISION PROTEIN KINASE 1 291 - -
Psa7g2171 294 CDD STKc_CDK1_CdkB_like 4 287 - -
Psa7g2171 294 Pfam Protein kinase domain 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2171 294 PANTHER CYCLIN-DEPENDENT KINASE A-2 1 291 - -
Psa7g2171 294 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Psa7g2171 294 Gene3D Transferase(Phosphotransferase) domain 1 86 292 - -
Psa7g2171 294 SMART serkin_6 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2171 294 SUPERFAMILY Protein kinase-like (PK-like) 1 290 IPR011009 -
Psa7g2171 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2171 Psa-Chr7 156042143 156049552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2171 1 294 Core Cell Cycle Gene Families AT3G48750 84.694 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Psa7g2171 Pkinase 1.1e-79 CL0016