Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2163 ATGGAGTGGATGATGCGAAAGACCAAGACGAAGAAGAAGCCGCCTCGATTCGAGCGACTCAACGCCAAAAAGAACATCAATTACCAACTCCCCACCACCACCGCCACCGCCACCGCCACCACCATCCAATCTCCAACTCCATCTCCTTCCGACGAAGAAACCAGTCTCCGTGTATTGGGAATCGACGGCGAATTCGACCGTATCTTTCAGAGTTTGGGCCTTTCTGGACCCGAAGATTTCTCTATCCCAACACAAGATTGGGAAGCTCGGAAGGTTCGCTCTTCCAACCTTGCTTCAATTTCAGTTTCTAATGATTCTGGTGTTGTGATTGTTAGTGATTCTCCTTCTTCCTCGGGGGAACATGATGTTAGGGATGTTGTTGATCCACTCAGAAACGGTGAAAGGAGTGTGCTTTTTACGGATTCTGGTTCTTTCACTACTTCGCATGATTATGATAGTGATGGTGGTGGTGGGGAGAGAACGGCGTTTCCTTATGGGTGGCTTAAACCCACTTTTTCTTCGTGGCAAAAAGGTGCCGTTCTGGGAAAGGGTTCTTTTGGAACGGTTTATGAATGCTTCACCGACGATGGATACTTTTATGCGGTGAAAGAGGTGTCTTTGTTGGATGATGGTAACCAGGGAAAACAAAGCATTTTCCAACTTCAGCAGGAAATATCACTTTTGAGTAGGTTTCAACATGAGAACATAGTTCGATATTATGGCTCAGACAAGAATGAAAGCACACTGTATATATTCCTTGAGCTTGTGTCAAAAGGGTCATTGGCCAGTCTTTATCAAAGCTATCACCTAAATGATTCTCAAGTTTCTGCATACACAAGACAGATTTTAAATGGCTTGAAGTATCTTCATGAAAATGATGTGGTCCACAGGGATATCAAGTGTGCTAATATACTGGTTGATGTAAATGGCTCAGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCTACAAAATTAAATGATGTTAAATCAAGCAAAGGCTCCCCATACTGGATGGCTCCTGAGGTTGTTAACTTAAGAAACCAAGGTTACGGGCTAGCAGCTGACATATGGAGCTTAGGATGCACGGTTTTAGAGATGTTGACAAGGAAGCCACCTTACTTTGAATTAGAAGGAATGCAAGCAATATTTCGGATTGGTAGGGGTGAACCTCCACCGATTCCTGAATCTCTATCTAATGATGCTCGAGATTTCATTCTTAAATGCTTACAAGTTAACCCAAGTAAACGCCCAACTGCAGCTCAACTATCAAATCATCCATTTCTAAGGAGACGATTAAGCGCAGAGAATGTCAAAATTTATCATCTATTTCTCAAGTTAATCCCCACACATCTTGAGTTTAGACCGGTGGAAATATCCATGAAAAGTAGCATGGGTTTGCACAATATGTACTGGAGTTGGACCTCGAAACTCTCTGGTTGCTTATCTCTATCACCTCTTGTGTTGGACCTCGAAACTCTCTGGTTGCTTATCTCTATCACCTCTTGTGTTGGACCACCACACCGATCCCAAGCTGAAGATAATTTCATCAAAAGGCAAGATTGCATTAACAAAATCAAGAGTTCCAAGAAGCTAAATTTCCACCTCTATGTCAAACGAGAAGAAGCAACGGCTCCTTATCTTGCATATGCAGCCAAAAGGAGACTGCAAATTTGCAACGGGCCTGAACAATTGGTCATTTGGAACAGAGTTGTCGAAACTTGCAGTCATATTGCTTCTACCGTTGCTTTTCAAGTCATAATTCCAATCCTAAAGCAATGGTTTTTGCAGTATATGCCCATACATTCACTTGATCCAATCAGGGTCTCATACTCATGGAATTGTTATTGCATGGAAATTCTAAATTCAACAGTATTGCAAAGTGGTGGCTGGTTGCTGATATTTGGTCATGAAAGATGCTGCCGCTACTGTACAAATGTTGTGTTATCTATGCCACTAGAGTGCGAAGTTGTACATGATTTTTGTGATCAATTAAACTGTATATAA 2004 0.4227 MEWMMRKTKTKKKPPRFERLNAKKNINYQLPTTTATATATTIQSPTPSPSDEETSLRVLGIDGEFDRIFQSLGLSGPEDFSIPTQDWEARKVRSSNLASISVSNDSGVVIVSDSPSSSGEHDVRDVVDPLRNGERSVLFTDSGSFTTSHDYDSDGGGGERTAFPYGWLKPTFSSWQKGAVLGKGSFGTVYECFTDDGYFYAVKEVSLLDDGNQGKQSIFQLQQEISLLSRFQHENIVRYYGSDKNESTLYIFLELVSKGSLASLYQSYHLNDSQVSAYTRQILNGLKYLHENDVVHRDIKCANILVDVNGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNQGYGLAADIWSLGCTVLEMLTRKPPYFELEGMQAIFRIGRGEPPPIPESLSNDARDFILKCLQVNPSKRPTAAQLSNHPFLRRRLSAENVKIYHLFLKLIPTHLEFRPVEISMKSSMGLHNMYWSWTSKLSGCLSLSPLVLDLETLWLLISITSCVGPPHRSQAEDNFIKRQDCINKIKSSKKLNFHLYVKREEATAPYLAYAAKRRLQICNGPEQLVIWNRVVETCSHIASTVAFQVIIPILKQWFLQYMPIHSLDPIRVSYSWNCYCMEILNSTVLQSGGWLLIFGHERCCRYCTNVVLSMPLECEVVHDFCDQLNCI* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2163 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
Psa7g2163 667 SMART serkin_6 175 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2163 667 Pfam Protein kinase domain 176 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2163 667 Gene3D Transferase(Phosphotransferase) domain 1 173 445 - -
Psa7g2163 667 SUPERFAMILY Protein kinase-like (PK-like) 160 468 IPR011009 -
Psa7g2163 667 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 4 98 - -
Psa7g2163 667 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 141 439 - -
Psa7g2163 667 ProSiteProfiles Protein kinase domain profile. 175 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2163 667 MobiDBLite consensus disorder prediction 32 53 - -
Psa7g2163 667 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 141 439 - -
Psa7g2163 667 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 98 - -
Psa7g2163 667 ProSitePatterns Protein kinases ATP-binding region signature. 181 203 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2163 Psa-Chr7 155801008 155806446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2163 133 432 MAP Kinase Kinase Kinase AT4G08500 60.656 1.29e-119 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa7g2163 Pkinase 2.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2163 - K13414 gmx:100820552 584.719