Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2159 ATGTCCACAATTTCACCAACATGCATCATCTTTCTTCCTATAATAATCCTATCATTTTGTCCCATGACAACACTATGTGCAACAGTTCTAGAAGACCTCAAAAACTTGCACAAACCACAAGATTTCAACACTACAATCATCAACAACTGTATCAGAAACCCATCTCTCAGATACTGCAATTCCTCGCCCATGATGGACCTTGACGAAATATTCAAACACACTATTGTTGCTAGCCATCTTTGCAATGAATCTAACAACCCTAATTGTGTTGAATCATTCCCCAAAATTGATCTTAGAAACCGACCAAACATTGCTCCTCTTTACTTGTCTTTCACTTTCTTCTGGAAATTTTGTCCTTTGACTGTTCTATCCATTGATTTCTCAAACAATTCTATGAAGGGTAGTTTTCCAAATGATGTTTTTTTCTGCACACAAGTTCAATCTCTTGATTTGAGTATCAATGAGTTTTCTGGTGAAATTCCTATTCAAAGTTTCTCTCCATTAACCAACCTCACTTTTCTTAACCTCTCTTATAACAGTTTCTCAGAAAGTGAAATTTCTGATTCGCAGTTTTTCAAAAAGTTTAATTCTTCTAGTTTTCTTCATTCTGGTGCTCTCATTGATCATAAAAAGTTTACTATAAAAGCTATCATTCTATTGGTTGGTTTTCCTATTCTTGTCATTTTAATGGTGATTTTCTTAGGATGGCTTTGTTTTCAAAGACCTGATTTTCTTCCAAGAATACTTCAAAGTGGGAGATATACATTTACACCGGCAATTCTAAAGTCGGCGACTTTCGGTTTTTCCAACAAGAATTTGATTGGTAAAAGTGAATTTGTTCACATATACAAAGGGGTGTTAAGAGATGGAACTAAAGTGAAAATTGAGATGTATTGGGATGATATATCAAAGGATAGTTATCATAGATTTGTTGAGGAATGTAAGATTTTGTCTGAGTTAAACCACAAGAACCTTGTTAAGGTTTTAGGTTGGTGTAATGGTAGAAAATTCAGGGCTGTTATAACAGAATGGATAAGAGAAAAAAGTGTTGAAATGTGGCTATCAGAGTCAGGTCCTTCATGGAATCATAGAGTGAAAGTTTTGATGGGAGTTGTTGAATGCATGTTGTATCTGCATGAGGAATGGCCTGAAGTTGATTATGATCTCAAGACAAGTAGTGTTCTGTTACATGATAATCTTGAACCTTTGATTTCAAGGTTTCAAATTGGAGATAGAAGCAATAGTCGAAAAAAGATATGCAAATTTGGAGCATTTCTCCTAGAGATGATACTAAACAAAAGTGTTCAAGAAGATTTTGATGGAAACGATGCTGGATTTATCAGCTACATGAGAACCCTTCATCCTCCAGACATGCAGAAGATGATTGATGAGAGAATGGATGTTACTGAAACAGCTTTGCATCATGTTAAGCAGGTTCTATCAATGGGAGTAATGTGTATAGACCAATCAAACAATGAGAAATTACCAAGCTTGGCACATTTATATAACATTGTATCAAAGGCCTATAAAGATAGCATTGTTTTACCATCTGCAAATCATAAAACAATTCATGGAGATAGAGCTAAGGGACATAAGCGCGTTCAGTTCAAATAA 1614 0.3494 MSTISPTCIIFLPIIILSFCPMTTLCATVLEDLKNLHKPQDFNTTIINNCIRNPSLRYCNSSPMMDLDEIFKHTIVASHLCNESNNPNCVESFPKIDLRNRPNIAPLYLSFTFFWKFCPLTVLSIDFSNNSMKGSFPNDVFFCTQVQSLDLSINEFSGEIPIQSFSPLTNLTFLNLSYNSFSESEISDSQFFKKFNSSSFLHSGALIDHKKFTIKAIILLVGFPILVILMVIFLGWLCFQRPDFLPRILQSGRYTFTPAILKSATFGFSNKNLIGKSEFVHIYKGVLRDGTKVKIEMYWDDISKDSYHRFVEECKILSELNHKNLVKVLGWCNGRKFRAVITEWIREKSVEMWLSESGPSWNHRVKVLMGVVECMLYLHEEWPEVDYDLKTSSVLLHDNLEPLISRFQIGDRSNSRKKICKFGAFLLEMILNKSVQEDFDGNDAGFISYMRTLHPPDMQKMIDERMDVTETALHHVKQVLSMGVMCIDQSNNEKLPSLAHLYNIVSKAYKDSIVLPSANHKTIHGDRAKGHKRVQFK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2159 537 Gene3D Phosphorylase Kinase; domain 1 250 344 - -
Psa7g2159 537 ProSiteProfiles Protein kinase domain profile. 268 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2159 537 SUPERFAMILY Protein kinase-like (PK-like) 250 407 IPR011009 -
Psa7g2159 537 Gene3D Ribonuclease Inhibitor 70 197 IPR032675 -
Psa7g2159 537 Pfam Protein tyrosine and serine/threonine kinase 271 411 IPR001245 GO:0004672|GO:0006468
Psa7g2159 537 Gene3D Transferase(Phosphotransferase) domain 1 346 514 - -
Psa7g2159 537 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 536 - -
Psa7g2159 537 SUPERFAMILY L domain-like 71 192 - -
Psa7g2159 537 SMART serkin_6 268 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2159 537 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2159 Psa-Chr7 155705325 155708104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2159 109 409 Receptor kinase-like Gene Family AT2G23950 27.855 1.32e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa7g2159 PK_Tyr_Ser-Thr 2.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2159 - - gmx:100779045 805.053