Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2155 ATGATCCTATTATGCATCTCCTTCCTTGCACTTGTTCTCATTCCCACAGCATCTCAAGGTGCAGGAGCCAATATTCTAGAGCAAAGTTCAAAACTTCAGGACGGTTCATCAGATTCTCTCAAGCCTGATACCAAAAAGCAGAATGACGTTGTTCATCGGCACAACAGGGGGGTTGCTGCCCGACCATTACATTTATCAAGGGGAGTGGAGAAACCAAGTGGAAGGGTCACATATACCGTTGTTCTTGAAGGTTTGTGTAGATTTAGTGTCCTGGAACTAAGCATAAGAGGAATATACCAAACTGCAAAGATATCTTCCCTTGAGATGACTATGACTGAGATGGAACAAATAGAGCAAGACCCAGATTACATAATGTTGTCTCGCCAATTCAAAGCAATAATAACGGAGCTTATTTCTATTCTGGAGTTGAAACAAAAAACTGGTGGAAGAACCAAAGTCCTTTTGGACAACGTTCCTGTTCACAAGTTAGCTGATATATTTGTTGCAAGTTTTGAGATAAGTTTTGAAGAACAACTATCTATGTTGGATTCAGTTGACCCTAAATTAAGGCTTTCAAAATCAACTGAGTTAGTTAATAGGCATTTACAGTCAATACATGTAGCTGAGAAAATTACACAGAAGGTTGAAGGTCAATTGTCAAAATCTCAAAAAGAGTTTCTTCTGCGTCAGCGGATGAGGGCTATAAAAGAAGAACTTGGTGACAACGAGGATGATGAGGATGACTTGGTTGCGCTTGAAAGAAAGATTCAGAGTGCAGGGATGCCGCCAAATGTATGGAAACTTGCACACATAGAGTTGAGGAGGCTTAAAAAAATGCATCCTCAGCAACCTGGGTACAATAGTTCGCGGGTTTACCTAGATCTTATTGCTGATCTGCCCTGGCAGAATGCTAGTGAAGAGAATGGACTAGAATTAAGAGTTGCACAAAAGCGACTGGACAGTGATCACTATGGTGTTGGGAAAACATCCCTGGCATCTTCTATTGCTGCTGCTTTAGGCAGAAAGTTTATTCGCATATACCTTGGTGGAGTCAAGGATGAGGCCGATATTAGAGGACATAGGAGAACATACGTTGGAAGCATGCCTGGGAGGCTTATAGATGGATTAAAGAGAGTAGCTGTTTGCAATCCTGTTATGTTGCTTGATGAAGTTGACAAGACATGTTCTGATGTTCGTGGAGATCCAGCTTCAGCATTGCTAGAAGTTCTTGATCCAGAACAAAATAAAACATTTAATGATCACTACTTGAATGTTCCGTTTGATTTTTCCAAGGTAATTTTTGTGGCTATAGCAAATAGGATGCAGCCTATTCCTCCACCACTACTGGATAGGATGGAAGTGATTGAACTTCCTGGATATACACCTGAGGAAAAGCTCCAAATAGCCATGCGGCATTTGATTCCAAGAGTTTTGGACCAACATGGGTTGAGTTCTGAGTTTATTCAGATTCCAGAGGCAATGGTGAAACTTGTCATTCAGAGGTATACCAGGGAAGCTGGTGTGAGGAATCCGGCGTGTGATGTTACACCTGCTAATCTAATTTCTGGGATCATCGCTGAGAAGGGTGTCATTACAAAGACTACCGCTGATGGTGTTTTTGACATAAACGTTTTCGTACAGAAAACAGGTTGA 1653 0.4144 MILLCISFLALVLIPTASQGAGANILEQSSKLQDGSSDSLKPDTKKQNDVVHRHNRGVAARPLHLSRGVEKPSGRVTYTVVLEGLCRFSVLELSIRGIYQTAKISSLEMTMTEMEQIEQDPDYIMLSRQFKAIITELISILELKQKTGGRTKVLLDNVPVHKLADIFVASFEISFEEQLSMLDSVDPKLRLSKSTELVNRHLQSIHVAEKITQKVEGQLSKSQKEFLLRQRMRAIKEELGDNEDDEDDLVALERKIQSAGMPPNVWKLAHIELRRLKKMHPQQPGYNSSRVYLDLIADLPWQNASEENGLELRVAQKRLDSDHYGVGKTSLASSIAAALGRKFIRIYLGGVKDEADIRGHRRTYVGSMPGRLIDGLKRVAVCNPVMLLDEVDKTCSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDFSKVIFVAIANRMQPIPPPLLDRMEVIELPGYTPEEKLQIAMRHLIPRVLDQHGLSSEFIQIPEAMVKLVIQRYTREAGVRNPACDVTPANLISGIIAEKGVITKTTADGVFDINVFVQKTG* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2155 550 CDD AAA 325 460 - -
Psa7g2155 550 MobiDBLite consensus disorder prediction 38 53 - -
Psa7g2155 550 MobiDBLite consensus disorder prediction 32 53 - -
Psa7g2155 550 Pfam ATP-dependent protease La (LON) substrate-binding domain 50 200 IPR003111 -
Psa7g2155 550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 325 510 IPR027417 -
Psa7g2155 550 Coils Coil 235 255 - -
Psa7g2155 550 ProSiteProfiles Lon N-terminal domain profile. 1 200 IPR003111 -
Psa7g2155 550 Gene3D - 251 299 - -
Psa7g2155 550 Gene3D - 323 457 IPR027417 -
Psa7g2155 550 Gene3D - 458 530 - -
Psa7g2155 550 SMART lon_5 10 200 IPR003111 -
Psa7g2155 550 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 25 326 - -
Psa7g2155 550 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 325 511 - -
Psa7g2155 550 Gene3D - 118 243 - -
Psa7g2155 550 SUPERFAMILY NagB/RpiA/CoA transferase-like 499 534 IPR037171 -
Psa7g2155 550 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 325 511 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Psa7g2155 550 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 25 326 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Psa7g2155 550 Pfam ATPase family associated with various cellular activities (AAA) 325 455 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2155 Psa-Chr7 155512810 155514551 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2155 508 548 Eukaryotic Initiation Factors Gene Family AT2G05830 63.415 2.25e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2155 K01338 - gmx:100789982 825.469