Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2147 ATGAATGCTCATGCTAACTTGCATAAGAGAAAATCTTCCTTGATTGCTGATGGGAATCATGCTGCTGCTGTTGCTTTTAAGACATCAAGGAAGGGAAGCTATGTGGACTCTCTTGAAAGAAAGGACGATGCTGTTGTTGATGATAACAACAACAATGAAGAAAAAACTGGAGGAGAAGATGCTGATGATGAGAAGAATAAGCCTTCTACTCGATGTTTCAGCCATGGATGTCATTTAATGGAAGGAGAAATGAACCACGGAATGGAAGACTATGTTTTTGCTCAACACAGGAAACTCAACGGTTACGATTTAGGATTGTACGCAATATTCGATGGACACGCAGGTCGTGACGTTGCAAAATATTTGCAAAACCATCTATTTGAAAATATACTGAATGAGCCTGATTTGTGGGAAAATCCAGTGCATGCTGTTAAGAAAGCATGTAAAGCTACCGACGACGAGATATTGGAAAACATAGCTGATTGGAGGGGAGGATCAACCGCTGTGGCAGCAATACTAATTAATGGAGTAAAGCTAATTGTAATCAATGTTGGCGATTCTCGCGCAATATCGTGTAAAAACGGTATTGCGAAACAGCTTACGGTGGATCATGAACCGGAGAAGGAGAGAGATCTGGTTGAGAGAAGAGGAGGTTTTGTGTCTAAGAGACCTGGGAATGTTGCAAGAGTAGATGGAGAGTTAGCTATGACAAGAGCATTTGGAGATGGAAAACTGAAAGAGCACATCACAGCAGAACCAGATGTGATGATTAAGAAGATTGATGATGACACTGAATTCATCATTTTGGCAAGTGATGGTTTGTGGAAGGTGATGACAAATCAAGAGGCTTGTGATTGTATTAAGGATGTCGATGATGCTCAAAAAGCAGCTAAAAAGTTGGTGAAAGAAGCCAAATCTATGGGAAGCTACGATGATATTTCATGCATTGTTGTTATGTTCTAG 963 0.405 MNAHANLHKRKSSLIADGNHAAAVAFKTSRKGSYVDSLERKDDAVVDDNNNNEEKTGGEDADDEKNKPSTRCFSHGCHLMEGEMNHGMEDYVFAQHRKLNGYDLGLYAIFDGHAGRDVAKYLQNHLFENILNEPDLWENPVHAVKKACKATDDEILENIADWRGGSTAVAAILINGVKLIVINVGDSRAISCKNGIAKQLTVDHEPEKERDLVERRGGFVSKRPGNVARVDGELAMTRAFGDGKLKEHITAEPDVMIKKIDDDTEFIILASDGLWKVMTNQEACDCIKDVDDAQKAAKKLVKEAKSMGSYDDISCIVVMF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2147 320 CDD PP2Cc 73 318 IPR001932 -
Psa7g2147 320 MobiDBLite consensus disorder prediction 39 68 - -
Psa7g2147 320 Gene3D - 70 320 IPR036457 -
Psa7g2147 320 Pfam Protein phosphatase 2C 86 313 IPR001932 -
Psa7g2147 320 PANTHER ALPHABET, ISOFORM E-RELATED 35 320 - -
Psa7g2147 320 ProSiteProfiles PPM-type phosphatase domain profile. 74 320 IPR001932 -
Psa7g2147 320 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 35 320 - -
Psa7g2147 320 SUPERFAMILY PP2C-like 71 320 IPR036457 -
Psa7g2147 320 SMART PP2C_4 64 318 IPR001932 -
Psa7g2147 320 ProSitePatterns PPM-type phosphatase domain signature. 106 114 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2147 Psa-Chr7 155322617 155323992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2147 71 320 PP2C-type Phosphatase Gene Family AT4G28400 56.972 1.85e-101 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2147 - - gmx:100814772 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2147 7 155322617 155323992 Psa7g2147 7 155322617 155323992 ECH