Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2146 ATGAGAATCAAGTATCTTGAAGCTGCATTGAAACAAGACATGGAAGTCTTCGACACTGAGGTTCGAACTTCGGACGTTGTTTTCGCAATCAATATTGATGTTGTCATGGTCCAGGATGCCATTAGTGAGAAGTTGAGAAATTTCATTCACTACATGGCTACTTTTGTTTCTAGTTTTGTTGAGGGATTCACCGCTGTTTGGAAATTGGCTTAG 213 0.3991 MRIKYLEAALKQDMEVFDTEVRTSDVVFAINIDVVMVQDAISEKLRNFIHYMATFVSSFVEGFTAVWKLA* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2146 70 Gene3D ABC transporter type 1, transmembrane domain 1 70 IPR036640 GO:0005524|GO:0016021
Psa7g2146 70 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 70 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa7g2146 70 SUPERFAMILY ABC transporter transmembrane region 1 70 IPR036640 GO:0005524|GO:0016021
Psa7g2146 70 Pfam ABC transporter transmembrane region 1 70 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa7g2146 70 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 1 70 - -
Psa7g2146 70 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 70 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2146 Psa-Chr7 155315064 155315276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2146 1 70 Calmodulin-binding Proteins AT2G36910 84.286 7.04e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2146 K05658 - gmx:100814667 119.783