Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2139 ATGGAATTCTCTGTAAGAGCTGCGGAACTAACAACTCTATTAGAAAGTCAAATTACCAACTTTTACACAAATTTTAAAGTGGATGAGATCGGTCGAGTGGTCTCAGTTGGAGATGGGATTGCACATGTTTATGGATTGAACGAGATTCAAGCTGGGGAATTGGTTGAATTTGCCAGCGGTGTGAAAGGAATAGCGTTGAATCTTGAGAATGAGAATGTCGGAATTATTGTCTTTGGTAGTGATACCTCTACCAAAGAAGGAGATCTTGTCAAACTTATTGGATCTATTGTGGATGTTCCCGCGGGAAAGGCTATGTTAGGGCGTGTGGTCGACGGGTTAGGAAAACGCTCAACTGTGGCACAATTAGTTCAAATTCTTTCAGAAGCGAATGCTTTAGAATATTCCATTCTTGTAGCAGCCACCGCTTCAGATCCAGCACCTCTGCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACACATTAATAATCTATGATGATCTTAGTAAACAGGTCGTGGCATATCGACAAATGTCATTATTGTTACGCCGACCACCAGGCCGCGAGGCTTTCCCAGACGATGTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCAAAATGGTCGGACCAGACAGGCGTAGGTAGCTTGACCGCCTTACCCGTCATTGAAACACAAGCTGGAGACGTATCGGCCTATATTCCCACCAATGTTATCTCCATTATGGATGGAAAAATCTGTTTGGAAACAGAGCTCTTTTATCACGGAATTAGACCTGCTATTAATGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAAACAAGTCTGCGGTAGTTTAAAACTGGAATTGGCACAATATCGCGAAGTGGCCGCCTTTGCTCAATTTGGCTCAGTTCTTAATTCTGAAGCCAGTGTCAACCAACCGGCCACGGACTATGCCAACTCTAGTGAACCCGACACACCTATTTATCACCCGTTACAGGAGGACGGACAGAGGCGCCAAGAACTCTCTGATCGTCTTGGTATTAATTGTATAGGAAGTTCTATGCCCGACGAAGTTCGGGAGTCCATTATACAAAGTCAAATTTCGATAGAACTTAAGATCGAGAAAACCCTTCGTTCAGACAGGTTTTCCGAAGATTCCCTTATGGAGAAAAGGCATCAGATAAGAGGGGTCCTCTTATACCCTAATGGGAAGGCTTTCTCATTACAGACTTATAATAAACACCTTCATTACATGGAGAACTTTGGAAGCCACCGTAGCGTCCCTTATAAGAGAGTTATGACAACTTTATATAATAAAGAACTGGAACTAGAAAAGAATTGA 1377 0.4357 MEFSVRAAELTTLLESQITNFYTNFKVDEIGRVVSVGDGIAHVYGLNEIQAGELVEFASGVKGIALNLENENVGIIVFGSDTSTKEGDLVKLIGSIVDVPAGKAMLGRVVDGLGKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHTLIIYDDLSKQVVAYRQMSLLLRRPPGREAFPDDVFYLHSRLLERAAKWSDQTGVGSLTALPVIETQAGDVSAYIPTNVISIMDGKICLETELFYHGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSVLNSEASVNQPATDYANSSEPDTPIYHPLQEDGQRRQELSDRLGINCIGSSMPDEVRESIIQSQISIELKIEKTLRSDRFSEDSLMEKRHQIRGVLLYPNGKAFSLQTYNKHLHYMENFGSHRSVPYKRVMTTLYNKELELEKN* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2139 458 Gene3D - 114 285 IPR027417 -
Psa7g2139 458 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 115 343 - -
Psa7g2139 458 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 6 114 - -
Psa7g2139 458 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 287 318 - -
Psa7g2139 458 Pfam ATP synthase alpha/beta family, beta-barrel domain 27 91 IPR004100 GO:0046034|GO:1902600
Psa7g2139 458 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 12 96 IPR036121 GO:0046034|GO:1902600
Psa7g2139 458 Pfam ATP synthase alpha/beta chain, C terminal domain 285 319 IPR000793 GO:0015986
Psa7g2139 458 Gene3D - 4 95 IPR023366 -
Psa7g2139 458 ProSitePatterns ATP synthase alpha and beta subunits signature. 269 278 IPR020003 GO:0005524
Psa7g2139 458 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 115 343 - -
Psa7g2139 458 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 6 114 - -
Psa7g2139 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 284 IPR027417 -
Psa7g2139 458 Gene3D - 286 329 IPR038376 -
Psa7g2139 458 CDD ATP-synt_F1_alpha_N 29 91 - -
Psa7g2139 458 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 112 278 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2139 Psa-Chr7 155086362 155089122 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2139 85 291 Primary Pumps ATPases(2) AT1G76030 26.540 1.47e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2139 K02132 - osa:6450183 376.326