LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g2139	ATGGAATTCTCTGTAAGAGCTGCGGAACTAACAACTCTATTAGAAAGTCAAATTACCAACTTTTACACAAATTTTAAAGTGGATGAGATCGGTCGAGTGGTCTCAGTTGGAGATGGGATTGCACATGTTTATGGATTGAACGAGATTCAAGCTGGGGAATTGGTTGAATTTGCCAGCGGTGTGAAAGGAATAGCGTTGAATCTTGAGAATGAGAATGTCGGAATTATTGTCTTTGGTAGTGATACCTCTACCAAAGAAGGAGATCTTGTCAAACTTATTGGATCTATTGTGGATGTTCCCGCGGGAAAGGCTATGTTAGGGCGTGTGGTCGACGGGTTAGGAAAACGCTCAACTGTGGCACAATTAGTTCAAATTCTTTCAGAAGCGAATGCTTTAGAATATTCCATTCTTGTAGCAGCCACCGCTTCAGATCCAGCACCTCTGCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACACATTAATAATCTATGATGATCTTAGTAAACAGGTCGTGGCATATCGACAAATGTCATTATTGTTACGCCGACCACCAGGCCGCGAGGCTTTCCCAGACGATGTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCAAAATGGTCGGACCAGACAGGCGTAGGTAGCTTGACCGCCTTACCCGTCATTGAAACACAAGCTGGAGACGTATCGGCCTATATTCCCACCAATGTTATCTCCATTATGGATGGAAAAATCTGTTTGGAAACAGAGCTCTTTTATCACGGAATTAGACCTGCTATTAATGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAAACAAGTCTGCGGTAGTTTAAAACTGGAATTGGCACAATATCGCGAAGTGGCCGCCTTTGCTCAATTTGGCTCAGTTCTTAATTCTGAAGCCAGTGTCAACCAACCGGCCACGGACTATGCCAACTCTAGTGAACCCGACACACCTATTTATCACCCGTTACAGGAGGACGGACAGAGGCGCCAAGAACTCTCTGATCGTCTTGGTATTAATTGTATAGGAAGTTCTATGCCCGACGAAGTTCGGGAGTCCATTATACAAAGTCAAATTTCGATAGAACTTAAGATCGAGAAAACCCTTCGTTCAGACAGGTTTTCCGAAGATTCCCTTATGGAGAAAAGGCATCAGATAAGAGGGGTCCTCTTATACCCTAATGGGAAGGCTTTCTCATTACAGACTTATAATAAACACCTTCATTACATGGAGAACTTTGGAAGCCACCGTAGCGTCCCTTATAAGAGAGTTATGACAACTTTATATAATAAAGAACTGGAACTAGAAAAGAATTGA	1377	0.4357	MEFSVRAAELTTLLESQITNFYTNFKVDEIGRVVSVGDGIAHVYGLNEIQAGELVEFASGVKGIALNLENENVGIIVFGSDTSTKEGDLVKLIGSIVDVPAGKAMLGRVVDGLGKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHTLIIYDDLSKQVVAYRQMSLLLRRPPGREAFPDDVFYLHSRLLERAAKWSDQTGVGSLTALPVIETQAGDVSAYIPTNVISIMDGKICLETELFYHGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSVLNSEASVNQPATDYANSSEPDTPIYHPLQEDGQRRQELSDRLGINCIGSSMPDEVRESIIQSQISIELKIEKTLRSDRFSEDSLMEKRHQIRGVLLYPNGKAFSLQTYNKHLHYMENFGSHRSVPYKRVMTTLYNKELELEKN*	459

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g2139	458	Gene3D	-	114	285	IPR027417	-
	Psa7g2139	458	PANTHER	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	115	343	-	-
	Psa7g2139	458	PANTHER	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	6	114	-	-
	Psa7g2139	458	SUPERFAMILY	C-terminal domain of alpha and beta subunits of F1 ATP synthase	287	318	-	-
	Psa7g2139	458	Pfam	ATP synthase alpha/beta family, beta-barrel domain	27	91	IPR004100	GO:0046034\|GO:1902600
	Psa7g2139	458	SUPERFAMILY	N-terminal domain of alpha and beta subunits of F1 ATP synthase	12	96	IPR036121	GO:0046034\|GO:1902600
	Psa7g2139	458	Pfam	ATP synthase alpha/beta chain, C terminal domain	285	319	IPR000793	GO:0015986
	Psa7g2139	458	Gene3D	-	4	95	IPR023366	-
	Psa7g2139	458	ProSitePatterns	ATP synthase alpha and beta subunits signature.	269	278	IPR020003	GO:0005524
	Psa7g2139	458	PANTHER	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	115	343	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g2139	Psa-Chr7	155086362	155089122	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa7g2139	85	291	Primary Pumps ATPases(2)	AT1G76030	26.540	1.47e-12	67.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g2139	K02132		-	osa:6450183	376.326

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