Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2111 ATGTCTGATGAACCTAAACAACCCTACTTCCAAAACTTCATCCTAGATCATCAAACAACAACAACAGATCAAGGATCTAACAACATGTATTGTGAAAAACAATTATCTACCTTTCCTAATTTATATGACTCTTCATCTTCACAACCTAATTGCTTTGATCCATCCTCTTATAACATGAGTTTCACAGAATGTTTACAAGGAACTAACATGGATCACTACAATTCATCCCTTGCTAACTCTTTTGGAGTACTATCTCCTTCTTCATCAGAGGTTTTTTCATCTGTTGATCAAGGAAACCAGCAAAAACCAGAAGTGGGTGCTGATCAAACCCTTGCTAACTCATCTGTCTCTAACTCCTCATCTTCTGAAGCTGGTGTAGCAGAAGAAGATTCAGGAAAAAGAAAGAAAAACGGACAAGTTATTAAAGAAGAACAAGGACAACAAGACAACACTAAAAATGGGAACAACAAGGTGGATAAGAAGAAAGGAGAGAAGAAACAGAAGGAACCAAGGTTTGCTTTCATGACAAAGAGTGAAGTTGATCAACTAGAAGATGGATATAGATGGAGAAAATATGGACAGAAAGCTGTTAAGAATAGTCCATACCCTAGGAGCTATTATAGGTGTACAACACAGAAGTGTACAGTGAAAAAACGCGTAGAAAGATCATATGAAGACCCAACAACTGTGATAACAACATATGAAGGTCAGCATAATCATCCTGTCCCCACTTCTCTTAGAGGCAATGCGGCTGCCATGTTCACACCTTCTTTGCTATCTGCACCTACCCCTTTTTCATATGGATCAAACTTCCCTCAAGATTTTCTTCTCCATATGCACCATCATCATAACAACACCTTCAATATCAGTTCTCAACCAAGTAGTACTAATTCTGCTTCTGTTGCTGCTTCCATTTTTTCACACAACAACAATGTTAACAACTCTCTTCTTCATCAGTATCAACAACAACAACAACTTGTTCCTGATCAATATGGATTGCTTCAAGATATTGTCCCTTCCATGTTCCTCAATAACTGA 1038 0.3776 MSDEPKQPYFQNFILDHQTTTTDQGSNNMYCEKQLSTFPNLYDSSSSQPNCFDPSSYNMSFTECLQGTNMDHYNSSLANSFGVLSPSSSEVFSSVDQGNQQKPEVGADQTLANSSVSNSSSSEAGVAEEDSGKRKKNGQVIKEEQGQQDNTKNGNNKVDKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSLLSAPTPFSYGSNFPQDFLLHMHHHHNNTFNISSQPSSTNSASVAASIFSHNNNVNNSLLHQYQQQQQLVPDQYGLLQDIVPSMFLNN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2111 345 MobiDBLite consensus disorder prediction 92 173 - -
Psa7g2111 345 ProSiteProfiles WRKY domain profile. 178 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g2111 345 Gene3D WRKY domain 167 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g2111 345 SMART WRKY_cls 183 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g2111 345 Pfam WRKY DNA -binding domain 184 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g2111 345 MobiDBLite consensus disorder prediction 154 173 - -
Psa7g2111 345 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 339 IPR044810 GO:0003700
Psa7g2111 345 PANTHER WRKY TRANSCRIPTION FACTOR 81 1 339 - -
Psa7g2111 345 MobiDBLite consensus disorder prediction 127 142 - -
Psa7g2111 345 MobiDBLite consensus disorder prediction 92 126 - -
Psa7g2111 345 SUPERFAMILY WRKY DNA-binding domain 175 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2111 Psa-Chr7 153948240 153950640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2111 39 343 WRKY Transcription Factor Family AT4G18170 46.440 1.42e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa7g2111 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2111 - - cam:101497541 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2111 7 153948240 153950640 Psa7g2111 7 153948240 153950640 ECH