Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2105 ATGGCCGCATCATCATCCATGGCTCTCTCTTCCCCAACCTTGGCTGGCAAGCCAGTCAAGCTGATCCCATCAAGCCAAGAATTGGGAGGTGCAAGGTTCACCATGAGGAAGTCTGCTACCACCAAGAAAGTAGCCTCCTCTAGTAGCCCATGGTACGGCCCAGACCGTGTTAAGTACCTAGGCCCATTCTCCGGTGAGTCTCCATCATACTTGACCGGAGAGTTCCCAGGTGACTACGGTTGGGACACTGCTGGACTTTCTGCCGATCCAGAGACATTTGCCAAGAACCGTGAGCTTGAAGTTATCCACTCCAGATGGGCTATGTTGGGAGCCTTGGGATGTGTCTTCCCAGAGCTTTTGTCTCGCAACGGTGTTAAATTCGGTGAAGCTGTATGGTTCAAGGCAGGATCTCAAATCTTTAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCTCAAAGCATCCTTGCCATCTGGGCCACTCAGGTTATCTTGATGGGAGCTGTTGAAGGTTACCGTATTGCCGGTGGCCCTCTTGGTGAGGTTGTTGACCCACTTTATCCTGGTGGTAGCTTTGATCCATTAGGCTTAGCTGAAGATCCAGAAGCTTTTGCAGAATTAAAGGTAAAGGAACTGAAGAACGGTAGATTAGCCATGTTCTCTATGTTTGGTTTCTTTGTTCAAGCTATTGTAACTGGAAAGGGTCCTTTGGAGAACCTTGCCGATCATCTTGCCGACCCAGTGAACAACAACGCATGGTCATATGCTACCAACTTTGTTCCCGGAAAGTGA 804 0.4975 MAASSSMALSSPTLAGKPVKLIPSSQELGGARFTMRKSATTKKVASSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2105 267 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 3 267 - -
Psa7g2105 267 SUPERFAMILY Chlorophyll a-b binding protein 50 264 - -
Psa7g2105 267 Pfam Chlorophyll A-B binding protein 68 233 IPR022796 -
Psa7g2105 267 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
Psa7g2105 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 267 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2105 Psa-Chr7 153778847 153780288 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2105 3 267 Chloroplast and Mitochondria Gene Families AT1G29930 86.891 1.61e-168 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2105 K08912 - fve:101297707 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2105 7 153778847 153780288 Psa7g2105 7 153778847 153780288 ECH