Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2102 ATGGCCGCTTCATCCATGGCTCTCTCTTCCCCAACCTTGACTGGCAAGCCAGTCAAGCTGAACCCATCAAGCCAAGAATTGGGAGGTGCAAGGTTCACCATGAGGAAGTCTGCTACCACCAAGAAAGTAGCCTCCTCTGGAAGCCCATGGTACGGACCAGACCGTGTTAAGTACTTAGGCCCATTCTCCGGTGAGTCTCCGTCCTACTTGACTGGAGAGTTCCCCGGTGACTACGGTTGGGACACTGCCGGACTCTCTGCTGACCCAGAGACATTCTCCAAGAACCAGACATTCTCCAAGAACCGTGAGCTTGAAGTCATCCACTCCAGATGGGCTATGTTGGGTGCTTTGGGATGTGTCTTCCCAGAGCTTTTGTCTCGCAACGGTGTTAAATTCGGTGAAGCTGTGTGGTTCAAGGCAGGATCTCAAATCTTTAGCGAGGGTGGACTTGACTACTTGGGTAACCCAAGCTTGGTCCATGCACAAAGCATCCTTGCCATCTGGGCTACTCAAGTTATCTTGATGGGAGCTGTCGAAGGTTACCGTATTGCCGGTGGCCCTCTTGGTGAGGTGGTTGACCCACTTTACCCAGGTGGTAGCTTTGACCCATTGGGCTTAGCTGACGACCCAGAAGCATTCGCAGAATTGAAGGTGAAGGAACTCAAGAACGGTAGATTAGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCTATTGTGACCGGAAAGGGACCTTTGGAGAATCTTGCTGATCATCTTTCCGACCCAGTTAACAACAATGCATGGTCATATGCCACCAACTTTGTTCCCGGAAAGTGA 819 0.5055 MAASSMALSSPTLTGKPVKLNPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNQTFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2102 272 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 272 IPR001344 GO:0009765|GO:0016020
Psa7g2102 272 MobiDBLite consensus disorder prediction 1 27 - -
Psa7g2102 272 SUPERFAMILY Chlorophyll a-b binding protein 49 269 - -
Psa7g2102 272 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 272 - -
Psa7g2102 272 Gene3D Chlorophyll a/b binding protein domain 57 265 - -
Psa7g2102 272 Pfam Chlorophyll A-B binding protein 67 238 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2102 Psa-Chr7 153688788 153689664 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2102 1 272 Chloroplast and Mitochondria Gene Families AT2G34430 85.036 4.76e-167 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2102 K08912 - csv:101211276 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2102 7 153688788 153689664 Psa7g2102 7 153688788 153689664 ECH