Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2100 ATGCAATGTTATCAAACTTCAAGTTCCATTGACCAATCCTATTCCAAAGTCATGTTATCTTCAAACCTTAACTTGACTATAGTCCTACTCATTTCAATTTCATCCATTATTATAGCTTCACATGCTCAATCATCAGCAAAAACAACCATTGAAATTGAAATTGAAGCATTGAAAGCTTTCAAAAAATCCATAACACATGACCCAAATAAAGTCCTTGCAAATTGGATTGACACACACCCTCATTGCAATTGGTCAGGCATTGAATGTAACAACAGTTCAAACCATGTTATATCAATTTCTCTACCTGAACTTCAACTCCAAGGTGAGATTTCACCTTTCCTTGGAAACTTTTCAAATCTTCAACTTCTTGATTTATCTTCAAACTCATTCACTGGTCAAATTCCTATTCAAATTACTCTTTGTACTCAACTTACATCACTTTACCTTGTTGAGAATTCTCTCTCCGGTTCGATTCCTTGCGAATTAAGCAACCTAAAAATGCTGCAGTATTTGGATTTAGGTGATAACTTTTTCAATGGAACCCTGCCTGATTGTTTATTTGAGATAACTTCTTTGTTAGGTATTGCTTTCAATTTCAACAATCTTACTGGAAGAATTCCGGAAAATATAGGGAATTTAGTTAACACTATACAGGTTGTAGGGTTTGGGAATAGTTTTGTTGGAGATATACCGGTTTCTATAGGTCGATTAGGATCTTTGAAATCTATTGATTTTAGTCAAAATAAGTTATCTGGTGCAATACCGAAAGAGATTGGAAACCTATCGAATTTGGAAAATGTTCTATTTTTTCATAATTCGTTGACCGGGAAAATTCCTTCTGAGTTGGGTCAATGTAGTAATCTTGTATACCTTGAGTTATATGAGAATGAGTTCATTGGAAATATTCCTCATGAGTTAGGTAATTTAGTTCAGTTGGAAACATTGAGGTTATTTGATAATAAGTTGAATTCGACTATACCAGATTCGATTTATAGGTTGAAATCGTTAACGCATTTAGGTTTATCACAGAATAACTTAGAGGGAACAATTTCTTCTGAGATTGGAAATTTGAGATCCTTAAAAGTGTTGACTCTGCATTTGAATAGGTTCACCGGGACGATTCCTTGGTCGATAACGAAGTTGAAGAACTTGACATCTTTGTCCATGAGTCAGAATCTTCTTTCAGGTGAAATTCCTTCAAACATAGGTGTGCTTCAAAATCTGAAGTTTCTTGTCTTGAGCAATAATTTTTTGCATGGTCTTGTTCCTCCTAGCATTACCAATTGTACTAGTTTGGTTAATGTGAGTTTATCGATTAATTCTTTAACCGGAAACATTCCTGAGGGCTTTTCGAGGCTTCCGAATTTAACTTTCCTGTCTCTAGTATCCAACAAAATGAGCGGTGAACTCCCTGATGATCTTTTCAATTGCTCGAATCTTAGTACTCTAAGTTTGGCGGATAATAACTTCAGTGGTTCGATAAAATTGGGTATCAAGAATCTGTTTAATCTCATGCGTTTGCAGCTGAACGGAAATGCTTTCGTAGGACCGATTCCACCAGAGATCGGTAACTTGAATAAACTCATCACTTTGTCCCTTTCTGAAAATAGATTTTCAGGTCATATACCGATCGAATTGTCCAAACTTTCTCTCCTTCAAGGACTTGCTCTCCATGACAATGTATTAGAAGGTACAATACCTGATAAACTTTCTGAACTGAATCGATTGACGATACTTTTGCTGCATGAAAACAAGTTGGCTGGTCAAATACCAGAGTCTATCTCAAAGCTTGAGATGCTTTCATACTTAGATCTTCATGGAAACAAACTCAATGGATCCATTCCGAAAAGCATGGGGAAGCTTGATCATCTTTTAATGATGGATCTCTCTCACAACCAGCTCACAGGATCGATTCCTGGAGACGTCGTTGCGCACTTCAAAGACTTGCAGATGTATCTTAACCTTTCTTACAACCATTTTGTTGGAAATGTTCCGTCTGAGCTAGGGATGTTGGAAATGGCACAAGCGATTGATGTTTCAAACAATAATCTTTCAGGTGTTCTTCCGAAGACACTTGCCGGGTGCAGAAACATGTTCAGTCTTGATTTCTCAGGAAACAATATTTCAGGTCCTATTCCTGCTGAAGTTTTCAGTGGCATGGACTTGCTTCAAACCTTAAATCTTTCAAGAAATCATTTCGATGGTGAAATCCCCAAAAGCTTGTCACACCTTAAGAGTCTTAGTTCCTTAGATCTTTCTCAAAATAACTTGAAGGGAACTATTCCGGAGGGCTTTGCCAATCTTTCCAACCTGATGCAGCTCAACTTTTCTTTCAATCAACTTGAAGGTCCTGTGCCTTTGACCGGAATATTTTCACGAATCAATGAATCTAGTATGGTAGGAAACCAGGCTCTTTGCGGAGCAAGATTCCTAAAGCCATGCAGAGAGAATGATCATTTCCTATCCAAGAAGAGCATAGCTATCATTGCTGCACTTGGATCTCTTGCTGTACTTCTATTTGTAGTGCTTCTGATTTTATATCTCAACCGAGGCACCATGTTCGGTAATTCTATAAAGAGTGATGAGAGTCACAAACCAGAGTGCGGTTCAGCGTTGGCTCTTAAAAGATTCAGTCCAAAGGAGTTAGAAAACGCCACCGGTTGTTTCAGCTCAGACTACATCATTGGTGCTAGCAGTTTGAGCACCGTTTACAAGGGTCAATTCGGAGACGGTCAGATTGTAGCCATAAAAAGGTTGAATTTGCACCAATTCTCTTCAAATACCGACAAGATCTTCAAGAGAGAAGCCAGCACTTTGTGCCAGCTGAGACATAGGAATTTGGTTAAGATACTTGGGTATGCTTGGGAAAGCGGGAAAACAAAGGCTTTAGTTCTTGAATACATGGAGAATGGGAACTTGGATAGCATCATCCATGACAAAGACGCAGATCAGTCGAGGTGGACATTATCTGAAAGAGTCCGAGTTTTCATTTCTATTGCGAGCGGATTGGATTACTTGCACTCAGGTTATGATTTTCCCATTGTCCACTGTGATCTAAAGCCTTCTAACATCCTTTTAGATAGAGATTTTGAAGCTCATGTCAGTGATTTCGGAACAGCTCGAATACTCGGTCTTCATCTAGAGGATGGTAATGGCCTTTCCTCATCAACAGCTTTGCAAGGCACAGTTGGCTATTTGGCACCAGAATATGCCTACATAACGAAAGTAACGCCTAAAGTGGACGTGTTCGGCTTTGGTATCATTGTAATGGAATTTCTAACAAAAATAAGGCCAACAGGGCTCTCAGAATCAGTCAGTTTGCATGATGTAGTGGCAAAAGCCGTTGCGAATGGAAAGGAGCAACTTGTCAACATTGTGGATCCTGAATTGATCATGAAAGACAAAGGGGAGGTGTTGGAAGAGCTCTTTAAGCTATCATTGTGCTGCACTCTCTCGGATCCTGAACACCGGCCTAATATGAATGAAGTTTTATCTGCCCTCGTGAAGCTTAAGACGGCAAGATAG 3525 0.3889 MQCYQTSSSIDQSYSKVMLSSNLNLTIVLLISISSIIIASHAQSSAKTTIEIEIEALKAFKKSITHDPNKVLANWIDTHPHCNWSGIECNNSSNHVISISLPELQLQGEISPFLGNFSNLQLLDLSSNSFTGQIPIQITLCTQLTSLYLVENSLSGSIPCELSNLKMLQYLDLGDNFFNGTLPDCLFEITSLLGIAFNFNNLTGRIPENIGNLVNTIQVVGFGNSFVGDIPVSIGRLGSLKSIDFSQNKLSGAIPKEIGNLSNLENVLFFHNSLTGKIPSELGQCSNLVYLELYENEFIGNIPHELGNLVQLETLRLFDNKLNSTIPDSIYRLKSLTHLGLSQNNLEGTISSEIGNLRSLKVLTLHLNRFTGTIPWSITKLKNLTSLSMSQNLLSGEIPSNIGVLQNLKFLVLSNNFLHGLVPPSITNCTSLVNVSLSINSLTGNIPEGFSRLPNLTFLSLVSNKMSGELPDDLFNCSNLSTLSLADNNFSGSIKLGIKNLFNLMRLQLNGNAFVGPIPPEIGNLNKLITLSLSENRFSGHIPIELSKLSLLQGLALHDNVLEGTIPDKLSELNRLTILLLHENKLAGQIPESISKLEMLSYLDLHGNKLNGSIPKSMGKLDHLLMMDLSHNQLTGSIPGDVVAHFKDLQMYLNLSYNHFVGNVPSELGMLEMAQAIDVSNNNLSGVLPKTLAGCRNMFSLDFSGNNISGPIPAEVFSGMDLLQTLNLSRNHFDGEIPKSLSHLKSLSSLDLSQNNLKGTIPEGFANLSNLMQLNFSFNQLEGPVPLTGIFSRINESSMVGNQALCGARFLKPCRENDHFLSKKSIAIIAALGSLAVLLFVVLLILYLNRGTMFGNSIKSDESHKPECGSALALKRFSPKELENATGCFSSDYIIGASSLSTVYKGQFGDGQIVAIKRLNLHQFSSNTDKIFKREASTLCQLRHRNLVKILGYAWESGKTKALVLEYMENGNLDSIIHDKDADQSRWTLSERVRVFISIASGLDYLHSGYDFPIVHCDLKPSNILLDRDFEAHVSDFGTARILGLHLEDGNGLSSSTALQGTVGYLAPEYAYITKVTPKVDVFGFGIIVMEFLTKIRPTGLSESVSLHDVVAKAVANGKEQLVNIVDPELIMKDKGEVLEELFKLSLCCTLSDPEHRPNMNEVLSALVKLKTAR* 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2100 1174 CDD STKc_IRAK 895 1170 - -
Psa7g2100 1174 Pfam Protein kinase domain 893 1165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2100 1174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1014 1026 IPR008271 GO:0004672|GO:0006468
Psa7g2100 1174 Gene3D Ribonuclease Inhibitor 642 821 IPR032675 -
Psa7g2100 1174 SUPERFAMILY L domain-like 546 809 - -
Psa7g2100 1174 SMART LRR_typ_2 525 549 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 165 189 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 744 767 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 573 597 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 671 694 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 768 793 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 405 429 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 381 403 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 453 477 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 720 743 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 309 333 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 237 261 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 117 141 IPR003591 -
Psa7g2100 1174 SMART LRR_typ_2 621 645 IPR003591 -
Psa7g2100 1174 Gene3D Ribonuclease Inhibitor 210 300 IPR032675 -
Psa7g2100 1174 Gene3D Transferase(Phosphotransferase) domain 1 968 1173 - -
Psa7g2100 1174 Pfam Leucine rich repeat N-terminal domain 53 90 IPR013210 -
Psa7g2100 1174 SMART LRR_sd22_2 333 356 - -
Psa7g2100 1174 SMART LRR_sd22_2 381 404 - -
Psa7g2100 1174 SMART LRR_sd22_2 237 263 - -
Psa7g2100 1174 SMART LRR_sd22_2 141 164 - -
Psa7g2100 1174 SMART LRR_sd22_2 405 437 - -
Psa7g2100 1174 SMART LRR_sd22_2 744 770 - -
Psa7g2100 1174 SMART LRR_sd22_2 597 623 - -
Psa7g2100 1174 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 312 400 - -
Psa7g2100 1174 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 387 1170 - -
Psa7g2100 1174 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 24 138 - -
Psa7g2100 1174 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 186 318 - -
Psa7g2100 1174 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 142 186 - -
Psa7g2100 1174 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 24 138 - -
Psa7g2100 1174 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 312 400 - -
Psa7g2100 1174 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 186 318 - -
Psa7g2100 1174 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 142 186 - -
Psa7g2100 1174 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 387 1170 - -
Psa7g2100 1174 Gene3D Ribonuclease Inhibitor 52 209 IPR032675 -
Psa7g2100 1174 PRINTS Leucine-rich repeat signature 624 637 - -
Psa7g2100 1174 PRINTS Leucine-rich repeat signature 744 757 - -
Psa7g2100 1174 ProSiteProfiles Protein kinase domain profile. 889 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2100 1174 SMART serkin_6 889 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2100 1174 Gene3D Ribonuclease Inhibitor 301 402 IPR032675 -
Psa7g2100 1174 Pfam Leucine rich repeat 676 733 IPR001611 GO:0005515
Psa7g2100 1174 Gene3D Phosphorylase Kinase; domain 1 852 967 - -
Psa7g2100 1174 Gene3D Ribonuclease Inhibitor 404 641 IPR032675 -
Psa7g2100 1174 SUPERFAMILY Protein kinase-like (PK-like) 871 1167 IPR011009 -
Psa7g2100 1174 SUPERFAMILY RNI-like 99 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2100 Psa-Chr7 153683553 153689285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2100 46 1171 Receptor kinase-like Gene Family AT5G46330 53.637 0.0 1130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa7g2100 Pkinase 7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2100 K13420 - gmx:100817960 1627.45