Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2099 ATGAGGAAGTCTGCTACCACCAAGAAAGTAGCTTCCTCTGGAAGCCCATGGTACGGACCAGACCGTGTTAAGTACTTAGGCCCATTCTCCGGTGAGTCTCCATCCTACTTGACAGGAGAGTTCCCCGTGACTACGGTTGGGACACTGCCGGACTCTCTGCTGACCCAGAGACATTCTCCAAGAACCGTGAGCTTGAAGTCATCCACTCCAGATGGCTATGTTGGAGCTTTGGATGTGTCTTCCCAGAGCTTTTGTCTCGCAACGGTGTTAAATTCGGCGAAGCTGTGTGGTTCAAGCGGATCTCAAATCTTTAGTGAGGGTGGACTTGATTACTTGGGCAACCCAAGCTTGGTCCATGCTCAAAGCATCCTTGCCATATGGGCCACTCAGGTTATCTTGATGGGAGCTGTCGAAGGTTACCGTATTGCCGGTGGGCCTCTCGCTGATGATCCAGAAGCATTCGCAGAATTGGAAAAGGTGAAGGAACTCAAGAACGGTAGATTAGCCATGTTCTCAATGTTTGGATTCTTCGTTCAAGCTATTGTAACTGGAAAGGGTCCTTTGGAAAACCTTGCTGATCATCTTGCAGACCCAGTCAACAACAATGCATGGTCCTATGCCACCAACTTTGTTCCCGGAAAATAA 645 0.4915 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPVTTVGTLPDSLLTQRHSPRTVSLKSSTPDGYVGALDVSSQSFCLATVLNSAKLCGSSGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLADDPEAFAELEKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2099 214 SUPERFAMILY Chlorophyll a-b binding protein 91 211 - -
Psa7g2099 214 Gene3D Chlorophyll a/b binding protein domain 83 207 - -
Psa7g2099 214 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 214 IPR001344 GO:0009765|GO:0016020
Psa7g2099 214 Pfam Chlorophyll A-B binding protein 119 180 IPR022796 -
Psa7g2099 214 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 40, CHLOROPLASTIC 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2099 Psa-Chr7 153502052 153502751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2099 1 214 Chloroplast and Mitochondria Gene Families AT1G29910 63.291 6.34e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2099 K08912 - han:110911705 273.863