Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2094 ATGGCCGCATCATCATCATCATCCATGGCTCTCTCTTCTCCAACTTGTGCTGGCAAGCAACTCAAGCTGACCCCATCAAGCAAGAATTGGGAGCTGCAAGATGGGCTTGTTGGCGAGCTTTGGGATGTGTCCTTCCCAGAGCTTTTGTTCTGCACCGGTGTTAAATTCGGCGAAGCTGTGTGGTTCAAGGCAGGATCTCAATCTTTAGTGAGGGTGGACTTGATTACTTGGGCAACCCAAGCTTGGTCCATGCTCAAAGCATCCTTGCCTATATGGGCCACTCAGGTTATCTTGATGGGAGCTGTCGAAGGTTACGTATTGCCGGTGGGCCTCTCGGTGAGAATTGAAGTGAAGGAACTCAAGAACGGTAGATTAGCCATGTTCTCAATGTTTGGATTCTTCGTTCAAGCTATTGTAACTGGAAAGGGTCCTTTGGAAAACCTTGCTGATCATCTTGCAGACCCAGTCAATAACAATGCATGGTCCTATGCCACCAACTTTGTTCCCGGAAAATAA 516 0.4806 MAASSSSSMALSSPTCAGKQLKLTPSSKNWELQDGLVGELWDVSFPELLFCTGVKFGEAVWFKAGSQSLVRVDLITWATQAWSMLKASLPIWATQVILMGAVEGYVLPVGLSVRIEVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2094 171 Pfam Chlorophyll A-B binding protein 114 137 IPR022796 -
Psa7g2094 171 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 43 108 IPR001344 GO:0009765|GO:0016020
Psa7g2094 171 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 114 171 IPR001344 GO:0009765|GO:0016020
Psa7g2094 171 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 43 108 - -
Psa7g2094 171 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 114 171 - -
Psa7g2094 171 SUPERFAMILY Chlorophyll a-b binding protein 45 168 - -
Psa7g2094 171 Gene3D Chlorophyll a/b binding protein domain 42 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2094 Psa-Chr7 153250455 153251261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2094 45 171 Chloroplast and Mitochondria Gene Families AT2G34420 60.784 1.29e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2094 K08912 - aof:109829214 187.578