Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2093 ATGGCCGCATCATCATCATCATCCATGGCTCTCTCTTCTCCAACCTTGGCTGGCAAGCAACATCAAGCTGACCCCATCAAGCCAAGAATTGGGAGCTGCAAGGTTCACCATGAGGAAGTCTGCTACCACAAGAAAGTAGCTTCCTCTGGAAGCCCATGGAGAGTTCCCGGTGACTACGGTTGGGACACTGCGGGACTCTCTGCTGACCCAGAGACATTCTCCAAGAACCGTGAGCTGAAGTCTTCCACTCCAGATGGGCTATGTTGGGAGCTTTGGGATGTGTCTTCCCAGAGCTTTTGTCTCGGCAACGCTGATGATCCAGAAGCATTCGCAGGAATGAAGGTGAAGGAACTCAAGAACGGTAGATTAGCCATGTTCTCATGTTTTGGTCTTCGTTCAAGCTATTGTAACTTGGAAAGGGTCCTGGAGAACCTTGCTGATCATTCTGCAGACCCAGTCAACAACAAAGGCATAGGTCAGCCACCAACTTTGTTCCCGAAAACACTCTATATTTATATGTTTGGTGAAGAATCTCTTCCCACCATTGTGAATTATTTATCATTATCTATCATGTGGGTATGCATAGGTTCACTAATACAAGATGATGGATGCTTTTTTTTTACCAAATTTTAA 633 0.4597 MAASSSSSMALSSPTLAGKQHQADPIKPRIGSCKVHHEEVCYHKKVASSGSPWRVPGDYGWDTAGLSADPETFSKNRELKSSTPDGLCWELWDVSSQSFCLGNADDPEAFAGMKVKELKNGRLAMFSCFGLRSSYCNLERVLENLADHSADPVNNKGIGQPPTLFPKTLYIYMFGEESLPTIVNYLSLSIMWVCIGSLIQDDGCFFFTKF* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2093 210 MobiDBLite consensus disorder prediction 1 24 - -
Psa7g2093 210 MobiDBLite consensus disorder prediction 1 19 - -
Psa7g2093 210 SUPERFAMILY Chlorophyll a-b binding protein 54 157 - -
Psa7g2093 210 Gene3D Chlorophyll a/b binding protein domain 95 161 - -
Psa7g2093 210 Pfam Chlorophyll A-B binding protein 102 131 IPR022796 -
Psa7g2093 210 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 6 56 - -
Psa7g2093 210 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 55 80 - -
Psa7g2093 210 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 100 157 - -
Psa7g2093 210 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 100 157 IPR001344 GO:0009765|GO:0016020
Psa7g2093 210 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 6 56 IPR001344 GO:0009765|GO:0016020
Psa7g2093 210 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 55 80 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2093 Psa-Chr7 153206951 153208181 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2093 5 80 Chloroplast and Mitochondria Gene Families AT2G34430 42.424 1.50e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2093 K08912 - jre:108990226 78.5666