Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2090 ATGGAAAAAGAGCCACTACTCCCATATTTCAGCCCCAAAAAACGGCTTTCCCCACTGCCTCCTCATCTTTTTCCTTTACCAGAGAATGATGAAATCGTTCTTCCTGTTACCCCTTCTGAGTTCAAGGATCGTCTCATCTTCGGACCTTCATGTGCTTCACCAAGAGACCCTTCACCTTTGGCGGATGCCTTAACACTTTCACGTAATTCTCCAAAAAATTCTCCCATTTGTTCCTCTTCACACGAGTTTGCATCAGCAACATCCACACTTTGTGATTCATCATCACAACTGTCTCAACAACAACAATTATCTTCTTGGCTCATTGACCCTAATTATCCATGGCGGAAAACCAATTTACATCGCTCCAAAACTGCACCGGCTATGGCGGTTATCAGTGATTTCAATCATCCAACTGTGAAAAGACCTCAATTTGGTAGCCAATCTATTGTTCATCAAGCTTTTATTCTTCTTGTTCTTTATTTGGCTTTAGGGGTTGTAATTTATTGGTTCAATCGTCATAGTTTTACAGCAACTGAGACTCATCCTATTGTAGATGCATTGTATTATCAAGCTTTTATTCTTCTTGTTCTTTATTTGGCTTTAGGGGTTGTAATTTATTGGTTCAATCGTCATAGTTTTACAGCAACTGAGACTCATCCTATTGTAGATGCATTGTATTTTTGTATAGTCACAATGTGCACAATTGGGTACGGTGACATTACTCCTAATAGTACTGCAACCAAGATTTTCTCTATATTGTTTGTGTTGATTGGTTTTGGTTTTGTTGATATATTGCTCAGTGGAATGGTTAGTTATGTTCTTGATTTGCAAGAGAATCATTTGTTGAGGGCAGTGAAGGGAAGGGGTGCCAAGGACGGGAGGTCGTATATAGTTGATGTGAAGAAAGGTAGGATGAGGATTAGGATGAAGGTGGCATTGGCATTGGGGGTTGTGGTACTTTGTATTGGAGTTGGTGTTGTGGTTATGCATTTTGTGGAAAGTCTTGGGTGGGTAGATTCCTTTTACCTTTCGGTTATGTCTGTTACAACGGTGGGGTATGGTGATCATGCTTTCAAGACTTTGCATGGCCGTATCTTCGCTGCAATTTGGTTGCTCGTGTCTACACTTGCAGTTGCCCGAGCTTTCCTTTATTTGGCTGAGGCAAGAGTGGATAAGCGGCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTGCTGAGTTTCTTGCTGCTGATATAGACAACAATGGATTTGTGAGCAAATCAGAATATGTTATATACAAGCTAAAGGAGATGGGAAAAGTATCAGAGAAGGACATCATGCAGATCAGTGAGAAATTTGATAGACTAGATACCGGCAACTTTGGAAAAATAACACTTGGTGATCTCATGGAGGATTGCGCACATGCCTTACAAAGCAACCCCAGAAAAAGGCTTTCCCCATTGCCTCCTCACCCTTTTCCTTTACCAGAAATGGTTCTTCCTGTTACCCCTTCTGAATTCAAAGATCATCTCATCTTTGGACCTTCATGTGCTTCACCAAGAAACCCTTCACCTCTTGTGGATGCCTCAACTCTTTTACGTGATTCTCCAAGATCTTCTTCCACTTGTTCCTCTTCGCACGAGTTTGCATCAGCAACATCCACACTTTGTGATTCATCGCAGCACTCTCAACAACAACAACTATCTTCTTGGCTCATTGACCCTAATTATCCATGGTGCAAAACCAATTTACATCCCTCCAAATCTGCACCGGCTATGGCGGTTATCAGTTATTTCGGTAACCAATCTATTGTTCATCAAGCTTTTATTCTTCTTGTTCTTTATTTGGCTTTAGGGGTTGTAATTTATTGGTTCAATCGTCATAGTTTTACAGCAACTGAGACTCATCCTATTGTAGATGCATTGTATTATCAAGCTTTTATTCTTCTTGTTCTTTATTTGGCTTTAGGGGTTGTAATTTATTGGTTCAATCGTCATAGTTTTACAGCAACTGAGACTCATCCTATTGTAGATGCATTGTATTTTTGTATAGTCACGATGTGCACAATTGGATACGGTGACATTACTCCTGATAGTACCGCAACCAAGATTTTCTCTATATTGTTTGTGTTGTTGGGTTATGGCTTTGTTGATATATTGCTCAATGGAATGGTTAGTTATGTTCTTGATTCGCAAGAGAATCATTTGTTGAGGGCAGTGAAGAGAAGGGGTGCGAAGGATGGGTGGTCATATATAGCTGATGTGGAGAAAGGTAGAATAAGGATTAGGATGAAGGTGGCATTGGCATTGGGGGTTGTGGTACTTTGTATTGGAGTCGGTGTCGGGGTTATGCATTTTGTGGAAAGGCTTGGGTGGATAGATTCCTTTTACCTTTCGGTTATGTCTGTGACAACAGTGGGCTATGGTGATCATGCGTTCAAGACTATGCATGGTCGTATCTTTGCTGCAATTTGGTTGCTTGTGTCTACGTTTGCGGTGGCCCGAGCTTTCCTTTATTTGGCTGAGGCGAGAGTGGATAAGCGGCATAGGCGGATGGCAAAGTGGATTCTTGATCAGGACATGACTGTTGCTGAGTTTCTTGCTGCTGACATAGACAATAATGGATTTGTGAGTAAATCAGAATATGTTGTATACAAGCTGAAGGAGATGGGAAAAGTGACAGAGAAGGACATCATGCAGATCAGTGAGAAATTTGATAGACTAGATACCGGCAACTTTGGAAAAATAACACTTGGTGATCTCATGGAGGGTCATAACGGATGA 2775 0.4119 MEKEPLLPYFSPKKRLSPLPPHLFPLPENDEIVLPVTPSEFKDRLIFGPSCASPRDPSPLADALTLSRNSPKNSPICSSSHEFASATSTLCDSSSQLSQQQQLSSWLIDPNYPWRKTNLHRSKTAPAMAVISDFNHPTVKRPQFGSQSIVHQAFILLVLYLALGVVIYWFNRHSFTATETHPIVDALYYQAFILLVLYLALGVVIYWFNRHSFTATETHPIVDALYFCIVTMCTIGYGDITPNSTATKIFSILFVLIGFGFVDILLSGMVSYVLDLQENHLLRAVKGRGAKDGRSYIVDVKKGRMRIRMKVALALGVVVLCIGVGVVVMHFVESLGWVDSFYLSVMSVTTVGYGDHAFKTLHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDIMQISEKFDRLDTGNFGKITLGDLMEDCAHALQSNPRKRLSPLPPHPFPLPEMVLPVTPSEFKDHLIFGPSCASPRNPSPLVDASTLLRDSPRSSSTCSSSHEFASATSTLCDSSQHSQQQQLSSWLIDPNYPWCKTNLHPSKSAPAMAVISYFGNQSIVHQAFILLVLYLALGVVIYWFNRHSFTATETHPIVDALYYQAFILLVLYLALGVVIYWFNRHSFTATETHPIVDALYFCIVTMCTIGYGDITPDSTATKIFSILFVLLGYGFVDILLNGMVSYVLDSQENHLLRAVKRRGAKDGWSYIADVEKGRIRIRMKVALALGVVVLCIGVGVGVMHFVERLGWIDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTFAVARAFLYLAEARVDKRHRRMAKWILDQDMTVAEFLAADIDNNGFVSKSEYVVYKLKEMGKVTEKDIMQISEKFDRLDTGNFGKITLGDLMEGHNG* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2090 924 Gene3D - 379 482 - -
Psa7g2090 924 Gene3D - 829 923 - -
Psa7g2090 924 PANTHER TWO-PORE POTASSIUM CHANNEL 3 190 466 - -
Psa7g2090 924 PANTHER TWO-PORE POTASSIUM CHANNEL 3 642 918 - -
Psa7g2090 924 PANTHER TWO-PORE POTASSIUM CHANNEL 3 99 189 - -
Psa7g2090 924 PANTHER TWO-PORE POTASSIUM CHANNEL 3 561 641 - -
Psa7g2090 924 SUPERFAMILY Voltage-gated potassium channels 644 741 - -
Psa7g2090 924 ProSitePatterns EF-hand calcium-binding domain. 867 879 IPR018247 -
Psa7g2090 924 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Psa7g2090 924 SUPERFAMILY EF-hand 410 919 IPR011992 -
Psa7g2090 924 Pfam Ion channel 645 725 IPR013099 -
Psa7g2090 924 Pfam Ion channel 193 273 IPR013099 -
Psa7g2090 924 Pfam Ion channel 769 838 IPR013099 -
Psa7g2090 924 Pfam Ion channel 317 386 IPR013099 -
Psa7g2090 924 Gene3D - 768 828 - -
Psa7g2090 924 Gene3D - 316 378 - -
Psa7g2090 924 PRINTS Two pore domain K+ channel signature 230 258 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa7g2090 924 PRINTS Two pore domain K+ channel signature 685 694 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa7g2090 924 SUPERFAMILY Voltage-gated potassium channels 755 860 - -
Psa7g2090 924 SUPERFAMILY Voltage-gated potassium channels 191 282 - -
Psa7g2090 924 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 190 466 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa7g2090 924 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 642 918 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa7g2090 924 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 99 189 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa7g2090 924 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 561 641 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa7g2090 924 Gene3D - 189 284 - -
Psa7g2090 924 Gene3D - 641 739 - -
Psa7g2090 924 SUPERFAMILY Voltage-gated potassium channels 302 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2090 Psa-Chr7 153019619 153026119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2090 481 924 Ion Channels AT4G18160 55.432 4.28e-157 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2090 K05389 - gmx:100804249 664.84