Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2079 ATGCAGACTCACGAGTATTTTCATCGGGGAAAGGTGGTGCTTCCTATGGCAGATGAAGCCATTGGTACTTATATGAATGCTCAACATACTTCTGCATTTGGTGCAGTTTTACCTCCAGGTGCGAGGCAGATAACGCCCTTTGAAAGGTTTAACTTGCATCCCTCTGAGGTTTGCCCCGAGAATTTCATTGTCTTCGATCAAACAGATCAACAAAACAGGGTTTTGTTCAACCCTGCGGCGACCTACAAGTTTAACAGTCATGGCTTCAACTTCAACACTCATGCATATACTCAGGATTTTGAAAAAGACAAAATTAATCAAATGGAAAGGGAATTGTCGTCTTCTTTTGAAGAGGACTCTAAGGACATTGATGCGTTGATGAGCCTAGACTCAGATGAGCTAGAAGACTATGATGAAGAAGAAGTTAGCACAGCAAGGACTCATGAAAAGGATGAAAGTACATCTGATACTTGCTCAAGCTATTGCACGAAATCAAGGAAGAAAAGGTTGTTATCATCTTCTGTTCAAAACTCTTCGGGTACCAAAGGTTACTGCAGCAGCAGTGAAAAGAAACAACACCAGGAGATGAAGAGGATGGTGAAAATATTGAGAAATATCGTGCCTGGCGGTGGCAATCAAATGGATACCGTCACTGTTTTGGACGAAGCTGTAAAATACCTCAAGTCTCTCAAGGTTGAAGTGGAACAATTTGGAGTTGGACAATGA 726 0.4187 MQTHEYFHRGKVVLPMADEAIGTYMNAQHTSAFGAVLPPGARQITPFERFNLHPSEVCPENFIVFDQTDQQNRVLFNPAATYKFNSHGFNFNTHAYTQDFEKDKINQMERELSSSFEEDSKDIDALMSLDSDELEDYDEEEVSTARTHEKDESTSDTCSSYCTKSRKKRLLSSSVQNSSGTKGYCSSSEKKQHQEMKRMVKILRNIVPGGGNQMDTVTVLDEAVKYLKSLKVEVEQFGVGQ* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2079 241 MobiDBLite consensus disorder prediction 141 155 - -
Psa7g2079 241 MobiDBLite consensus disorder prediction 133 158 - -
Psa7g2079 241 SMART finulus 186 236 IPR011598 GO:0046983
Psa7g2079 241 MobiDBLite consensus disorder prediction 172 187 - -
Psa7g2079 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 236 IPR036638 GO:0046983
Psa7g2079 241 MobiDBLite consensus disorder prediction 172 192 - -
Psa7g2079 241 Gene3D - 185 238 IPR036638 GO:0046983
Psa7g2079 241 PANTHER TRANSCRIPTION FACTOR BHLH144 1 240 - -
Psa7g2079 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 230 IPR011598 GO:0046983
Psa7g2079 241 PANTHER TRANSCRIPTION FACTOR BHLH145 1 240 IPR037546 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2079 31 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 37.778 7.36e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2079 - - mtr:MTR_4g096660 366.696