Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2075 ATGCACATATGGAATGAGAGAGAAAGGAGAAAGAAAACAAGGAACATGTTTTCTAGCCTTCGTGCTTTGCTTCCAGATCTTCCCTCTAAGGTTGATAAGTCAACCATTGTGGATGCAGCAGTGAAAGAAATAAAATATTTACAACAGATTCTTGAAAATTTAGAAAAGAAGAAGCAAGAAAAGCTTAAATCTATGTCCCCATTTGTGACACAATTCTGCATATGTGCAACTAATAAGTTGGGGATCTTGACAAAAATTGTTTTTGTGTTGGAGAAACATATGATTGATGTTGTATCTATCAATATTATGCGCAATGGAAATGGAAAAGTGTACATGATTCTAGTTCATGCAAGCAAAGGTTCATATGACACAAATTCAATGGAGGAAACTTACAAGCAAGCGGCCGGAGGAATTTTGATGTTGATATCTTAA 432 0.3519 MHIWNERERRKKTRNMFSSLRALLPDLPSKVDKSTIVDAAVKEIKYLQQILENLEKKKQEKLKSMSPFVTQFCICATNKLGILTKIVFVLEKHMIDVVSINIMRNGNGKVYMILVHASKGSYDTNSMEETYKQAAGGILMLIS* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2075 143 PANTHER - 71 140 IPR044278 GO:0003700|GO:0006355|GO:0009960
Psa7g2075 143 PANTHER - 1 64 IPR044278 GO:0003700|GO:0006355|GO:0009960
Psa7g2075 143 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 69 IPR036638 GO:0046983
Psa7g2075 143 SMART finulus 5 53 IPR011598 GO:0046983
Psa7g2075 143 Pfam Helix-loop-helix DNA-binding domain 3 48 IPR011598 GO:0046983
Psa7g2075 143 Gene3D - 1 66 IPR036638 GO:0046983
Psa7g2075 143 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 47 IPR011598 GO:0046983
Psa7g2075 143 PANTHER TRANSCRIPTION FACTOR BHLH95 1 64 - -
Psa7g2075 143 PANTHER TRANSCRIPTION FACTOR BHLH95 71 140 - -
Psa7g2075 143 Coils Coil 37 64 - -
Psa7g2075 143 SUPERFAMILY ACT-like 69 115 IPR045865 -
Psa7g2075 143 CDD bHLH_AtbHLH_like 2 49 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2075 Psa-Chr7 151538559 151539477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2075 1 66 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 65.152 7.87e-22 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Psa7g2075 HLH 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2075 - - ccaj:109816148 112.079