LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g2013	ATGGTTCCTGTATGGCTACTCACCGTAACAGTAACAGTAGCTACTTTACTGTTAACAACACTAACACAAGCTCAACCAGAAGCAAATTTCAAATGCGCCACCGAAGCCACGTGTCGCAGTCTAACCGACTACGCTTCCGCCAACGCAACAACCTTAAAGGAAATCGAAACCCTGTTCGGCGTGAAACACTTCCTCGACCTCCTCGGAGCCAACAACCTCCCAACCGACACCAAAAACACTTACAAACTAAACGCCAGCCAAGTCATTAAGGTTCCGTTTCCCTGCAAATGCGGCAACGGAATCGGTAAATCCAACAATTTACCACGGTACAAAATAAAACCAGGTGACACGTTAAGCGAAATAGCGACGGTTCGTTTTGCCGGTTTGGTGAAGTATCAACAGATCCAAACCGCTAATAACATACCAGATGCTAACAATACCACGATCCAAACCGCTAATAACATACCAGATGCTAACAATATAACCGCCGGTGATACGCTTTGGATTCCTTTGCCTTGTAGCTGTGATAAGGTGGATGACAGCAGTGTTTTGCATTATGCACATGTTGTGGAAGCTGGTAATACCATTGATATCATTGCTCAAAAATATGGTACAACACCACAAACTCTACTCTCTATCAACGGTATTGATGATCCTAAAACACTTCAAGCCGGTCAAGTTCTAGATGTTCCTCTTCCAGTTTGTAAATCAAATGTTGGAAATAATTCCGTGGATTTTCCATTGCTTGTTCCAAATAGGACTTATTTCTATACTGCAAATGATTGTGTTAAATGTAAATGTGACTCTACTGGTAGTAATAACAACAGCAATTCTATGTTGCAATGCGAGGAGTCGAATATAAAACCGATAAATCATTGGTCGGTTTGTCCGTCTGCGAAATGCTCTGGGAATGTGTTGATTGGGAATACTACGTCTACTGATTCGTGTAATCGGACATTTTGTGATTACGCTGGTTATACTTCTCGCAATATCTCTACGGTTCTTGCAACTCAAAACACTTGTGCTGTGGCGCCAAGTGGTTCGAGCGGTTCGGGTTCGGGTTCAGGTGGTTCGGATTCAGGGGCATCTAGGAGTATCTTGAATGGCTGGGTTTGGAATAAGCTTCTTATTCTCATTCACTTCCTTCTGTTTTTTGTTTATCTTTTGTAG	1170	0.4265	MVPVWLLTVTVTVATLLLTTLTQAQPEANFKCATEATCRSLTDYASANATTLKEIETLFGVKHFLDLLGANNLPTDTKNTYKLNASQVIKVPFPCKCGNGIGKSNNLPRYKIKPGDTLSEIATVRFAGLVKYQQIQTANNIPDANNTTIQTANNIPDANNITAGDTLWIPLPCSCDKVDDSSVLHYAHVVEAGNTIDIIAQKYGTTPQTLLSINGIDDPKTLQAGQVLDVPLPVCKSNVGNNSVDFPLLVPNRTYFYTANDCVKCKCDSTGSNNNSNSMLQCEESNIKPINHWSVCPSAKCSGNVLIGNTTSTDSCNRTFCDYAGYTSRNISTVLATQNTCAVAPSGSSGSGSGSGGSDSGASRSILNGWVWNKLLILIHFLLFFVYLL*	390

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g2013	389	CDD	LysM	188	230	IPR018392	-
	Psa7g2013	389	PANTHER	LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2	14	342	-	-
	Psa7g2013	389	Pfam	LysM domain	188	231	IPR018392	-
	Psa7g2013	389	Pfam	LysM domain	110	170	IPR018392	-
	Psa7g2013	389	ProSiteProfiles	LysM domain profile.	108	169	IPR018392	-
	Psa7g2013	389	CDD	LysM	110	169	IPR018392	-
	Psa7g2013	389	SUPERFAMILY	LysM domain	186	232	IPR036779	-
	Psa7g2013	389	Gene3D	LysM domain	105	182	IPR036779	-
	Psa7g2013	389	Gene3D	LysM domain	183	239	IPR036779	-
	Psa7g2013	389	ProSiteProfiles	LysM domain profile.	186	230	IPR018392	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g2013	Psa-Chr7	147817959	147819389	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa7g2013	6	333	LysM Receptor-like Protein (LYPs) Gene Family	AT2G17120	43.675	4.65e-77	240

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g2013	-		-	cam:101506878	504.212

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