Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2008 ATGGACATTCTTACTTCAACCGTGTTCTTATCACAAACGTTGGTGGTGTTGGTGATGTGGTTGCTGCTTCCATCAAAAAGGTCAAAAACTGGTTGGATTTCTATGTCAAGAAACTGGGGACAGAACTGGCAAAGCAAGAATTATCTTAACGGTCAAAGCTTACCTTTCAAGGTTATAACAAGTGATGGTCGAACTGTGTTCTCCAATAATGTTGCTCCAGCTACATGGTCTCGATGCCTTCCATCGAAATCGCAGTCGCGTATTCACAACCAACAAACATAG 282 0.422 MDILTSTVFLSQTLVVLVMWLLLPSKRSKTGWISMSRNWGQNWQSKNYLNGQSLPFKVITSDGRTVFSNNVAPATWSRCLPSKSQSRIHNQQT* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2008 93 PANTHER EXPANSIN 26 77 - -
Psa7g2008 93 PRINTS Expansin signature 41 62 IPR002963 GO:0009664
Psa7g2008 93 PRINTS Expansin signature 70 86 IPR002963 GO:0009664
Psa7g2008 93 Pfam Expansin C-terminal domain 29 73 IPR007117 -
Psa7g2008 93 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 1 77 IPR007117 -
Psa7g2008 93 PANTHER EXPANSIN-A15 26 77 IPR002963 GO:0009664
Psa7g2008 93 Gene3D - 11 80 IPR036749 -
Psa7g2008 93 SUPERFAMILY PHL pollen allergen 26 77 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2008 Psa-Chr7 146833701 146833982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2008 26 77 Expansin Gene Family AT2G03090 73.077 1.36e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2008 - K20628 dcr:108199937 95.5153