Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2004 ATGGATTTTTCAAAGCTGCCTCCTGGTGGGTCTATCAATATCAATTTTGAAGAATACAATGAAGAAGCTTCAAATCAAAAGAGTAAGAAGCAAAATCTCCAATCATCTCACAATCAAGACCAAGTAGCTAGATTTGAAGGAATACGCCACCAATGTCCGCATCCTGAACAATTCAAGCATATGTTTCAAAGAAAACCAAACCAAATCAAGGAACTTATCCCAGCTGAAGCGATACAACAAACTATTCGAAATTCGCAGCAACAAAATGAGGTGTTACGTCAAGAGCAGGAGAAAGTAACCAATGTTAGTGGAAGAGGAAGAGGAAAGAGAAAAAATACAATGTTCTCACAAGAAAATTCGAGAAACGTAAACAATGAAATGATGATTCCTGCAACAAAAATTTTCACTGTTGTTCCACACCTGGCATCATGCTATAAAAATAATCATCGTGTTGAAAGTCATATTGATATTGATGTCGATTATGATCAAAATTATTTTGATGTGACTCGTGAATCTCAACAAACTGGGACATCTCTTACTCATGCAGCTGAAAAAACTGTTCAAGATGATGAAACTACTCATGTTGTAAATTCATCCGATGGTCAAAATTTACGTGTTATTACTACTACTGCACATAAACAAAATGTTTCAGCTTACAGTGATACGTATCTTTATGAAGATGATGTTGTTTCGAATTGGTTGTTCTCAGAAGATGTTCCTAGTTTAGATCATGTTCTTCGTGATACTTCTATTCGTGGTCTTGTTCCTGATCCTAATCTGACTTCTGGTAATCATGTTTCTACAGTTGATAAGGATGTTGTCCATGTTCTTAATTCGGCTTCAGGTAATCATGTTGCTATCATTGATAAGGATGTTGTTCCAGATCCTAATCCTGCTTCTGGTAATCATGTTTCTACCATTGATAAGGATGTTGTTTCTGATCCTAATATTGCTTCTGGTAATCATCGCATTGCTATCGTTGACGAGGATATTGTTCGTGATCCAAATCTTTCTTTTGGTAATTGCATTGCTACCGTTGATGAGGATATTGTTCGTGATCCTAATCTTGCTTCTGCTAATCACATTGCTACCAATTATGAGGATGTTGTTCCTATTGCCTCTGATAAAGATGTCAGTGCATTTGATATTGCAGTTTTTGGTGGTTGTTTGCCTCACCCAATAGGCATGGCTATGGAATCTGAGAAGAAAGTGATCACAGAGACTGCTTATAATGCTTTGGAGGAGTTAACAAGGATGATAAAACTGAATGAACCGTTCTGGTTTAGTTCGACAAAGACTGGCAAGTTCATTCTTCAACGTGAAACCTATGACAACTTTTATAAAAAGATCAGCGTCTTAAATGGACCTGATGCGCGTATTGAGGCCTCGAAGGAATCACTAGTTGTCAGCATGGCTGGTGCACAATTGGTTGACATGTTCCTTGATTCGATGCATGCAAAAATGCACATTCTTTCTCCATTGGTTCCAACTCGACACACCTCGTTCCTTCGTTGTTGTAAACAAATTGACAAAGACATATGGGTAATAGCTGATGTATCATCACTGTCAATTCGTTCCATATTCGATGCATGTATTCAAAATGTTTGGAAGTTTCCATCTGGATGCATGATTCAAAAACTTACAAATGACTCATGCAGGGTAACTTGGGTGGAACATATACAAGTGGACGATAAGCGGACAACCGACACTTTCTTCGAAAAACCAGTTTGTGGAAACAATGGATATAGAGCTGAAAGATGGGTTTTAACAATGGAAAGAATGTGTCAGAGAATTTCAACCTCTTTAGTTCCAAATACATCTAGCACTGACATCACCACAAGAGCGAAAAGGATTGTAATGAAGCTTGCTGAACGAATGCTAAAAATATTTTATGAAGCATTGGACATGGCATCAAACACAGATTTTCCAAAGCTGAATACAATGGATTCTGATGGAGTTAGGGTTTGTGTTCGAAAATGTACCGATCCAGGAACTGAAAATGGAGTCATCCTCACTGCTTCTCTCACCTTTTGGCTATCATGCTCTCCAGATCATGTCTTTGATTTCTTCAAAGATAGTAGTAGAAGATTTCAGTGGGATGTTCTATGCGAAGGTTATCCTACCGAAGAAATTCATCGGATAACAAACGGAACCAATCCGGGAAACTTCACTTCAATTATCAAGACTTTGAACGTGAAAGATGAAGATATGAGGATTCTGCAAGAGTGTTATACACATTCTATGGAATCTGGTTTGGTTTATTGTCCGATCGATACAAACACAATGAATTGTGCGATAAGAGGAGAAGATTGTTCCATGTTGCCTCTTCTTCCATCTGGTTTAACCATATCAGGGGATGGACGACTTTCCGATCAAAATATAGGGAAAGTAATTGGTGAATGGTATGAAGGTTCAATCGTGACTTTAACTTATCAGATGCTGATCGGTAAAGATTCAAAAATGAATAGTCCTGACTTAAACGTGTTGAAGAAAATAAATAAGTTTGTTAACTCGGCAGTGAACAAAATCAGAGATGCTTTGAATTGTAGTGATTATTAG 2559 0.3759 MDFSKLPPGGSININFEEYNEEASNQKSKKQNLQSSHNQDQVARFEGIRHQCPHPEQFKHMFQRKPNQIKELIPAEAIQQTIRNSQQQNEVLRQEQEKVTNVSGRGRGKRKNTMFSQENSRNVNNEMMIPATKIFTVVPHLASCYKNNHRVESHIDIDVDYDQNYFDVTRESQQTGTSLTHAAEKTVQDDETTHVVNSSDGQNLRVITTTAHKQNVSAYSDTYLYEDDVVSNWLFSEDVPSLDHVLRDTSIRGLVPDPNLTSGNHVSTVDKDVVHVLNSASGNHVAIIDKDVVPDPNPASGNHVSTIDKDVVSDPNIASGNHRIAIVDEDIVRDPNLSFGNCIATVDEDIVRDPNLASANHIATNYEDVVPIASDKDVSAFDIAVFGGCLPHPIGMAMESEKKVITETAYNALEELTRMIKLNEPFWFSSTKTGKFILQRETYDNFYKKISVLNGPDARIEASKESLVVSMAGAQLVDMFLDSMHAKMHILSPLVPTRHTSFLRCCKQIDKDIWVIADVSSLSIRSIFDACIQNVWKFPSGCMIQKLTNDSCRVTWVEHIQVDDKRTTDTFFEKPVCGNNGYRAERWVLTMERMCQRISTSLVPNTSSTDITTRAKRIVMKLAERMLKIFYEALDMASNTDFPKLNTMDSDGVRVCVRKCTDPGTENGVILTASLTFWLSCSPDHVFDFFKDSSRRFQWDVLCEGYPTEEIHRITNGTNPGNFTSIIKTLNVKDEDMRILQECYTHSMESGLVYCPIDTNTMNCAIRGEDCSMLPLLPSGLTISGDGRLSDQNIGKVIGEWYEGSIVTLTYQMLIGKDSKMNSPDLNVLKKINKFVNSAVNKIRDALNCSDY* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2004 852 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 26 483 - -
Psa7g2004 852 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 484 849 - -
Psa7g2004 852 Pfam START domain 482 565 IPR002913 GO:0008289
Psa7g2004 852 SUPERFAMILY Bet v1-like 626 845 - -
Psa7g2004 852 MobiDBLite consensus disorder prediction 21 41 - -
Psa7g2004 852 SUPERFAMILY Bet v1-like 401 563 - -
Psa7g2004 852 Coils Coil 16 36 - -
Psa7g2004 852 Coils Coil 75 102 - -
Psa7g2004 852 ProSiteProfiles START domain profile. 398 600 IPR002913 GO:0008289
Psa7g2004 852 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 26 483 IPR042160 -
Psa7g2004 852 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 484 849 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2004 Psa-Chr7 146060944 146065594 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2004 399 849 Homeobox Transcription Factor Family AT1G17920 32.998 9.75e-82 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2004 K09338 - rcu:8266520 365.925