Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1993 ATGAGTATTTCAACATTTCTTGTAGTAGTTTTGTTCCTTGTGTGTTCAATTCTAGTACTTGGTGAAGAAAAGTTAGATAAAGAAACAACTTTTAGAGTGCTTTTGGAAGTGAAAAAATCTTTTGTACAAGACCCAGAAAATGTTTTGAGTGATTGGTCAGAAGAAAACACAGATTACTGTAGTTGGAGAGGTGTTTCATGTGGTTTGAACTCGTTGGTTGAGGACTCAGTGCATGTGGTGGGACTCAACCTTTCTTATTCGTCACTCACTGGGTCAGTTTCACCTGAACTCGGTCGTTTGAAAAACTTGATTTTTCTTGATCTTTCTTCTAATGGTCTCACGGGTCCTATTCCATTGAATCTTTCTAACCTTGTTTCATTGGAATCTCTGCTTCTGTTTTCTAACCAACTCAATGGCTCTGTTCCCACTGAGTTTGGCTCGCTGACGAGTCTCCGAGTCATGCGACTCGGTGACAATGCGTTAACCGGTATGATTCCGGCGTCTCTTGGGAAATTGGTTAAGTTGGTGAGTCTTGGTCTAGCTTCATGTGAGCTGACCGGGTCGATTCCACCTGAACTCGGTCAACTCGGTCTCCTGGAGAATCTGGTTCTGCAGGAGAACGAGTTGATAGGTCCGATTCCGTCCGAGTTAGGAAACTGCTCAAGCCTCATAGCCTTCACTGCTGCTAACAACAAACTCAATGGCTCAATTCCGAGTGAATTGGGTCAACTCGAGAATCTACAAATTCTCAACCTTGGTAACAATAGTTTAACAGGGGAGATTCCGAGTCAACTCGGTAATATGAGTGAACTCGTTTATCTCAACTTCATGGGGAACCAGCTTGAAGGTGCAATTCCACCGTCTCTAGCTCAACTGGGTAACCTTCAAAAACTTGACTTGTCTATGAACAAGCTCAGTGGAGGGATTCCAGAGGAGTTCGGCGACATGGGTCAGTTAAGTTTCATGGTTCTGTCGGGTAACAACCTTAATAATGTCATACCAAGAACAATATGTTCCAATGCAACAAATTTGGAGCATTTGATGCTATCAGAAAGTGGACTTTATGGTGAGATTCCAGCTGAACTGAGTCAGTGTCAGTCACTGAAACAACTTGACTTGTCGAACAATTCACTCAATGGATCCATACCTCTTGAGATTTATGGGTTGGTGGAGTTAACTGATCTTTTGCTAAACAACAATAGCTTGGTTGGTTTCATCTCTCCATTCATAGGAAACTTCAGCAACTTGCAGACACTTGCATTGTATCACAACAATTTGAAGGGTGATCTTCCGAGAGAGATTGGAATGCTTGGGAAGTTGGAAATTTTATATCTTTATGATAATCAATTATCTGGGGCTATACCTATGGAGATTGGTAACTGTTCGAGTTTGCAAATGATTGATTTCTTTGGCAACAGATTCAAGGGGGAAATTCCCATCACTATTGGAAGGCTGAAAGAGTTGAATTTTCTTCACCTCAGGCAGAATGAGCTTGTGGGTGAAATTCCTGCCAGTTTAGGTAACTGTCATAAACTGAAGATCATGAGTTTGGCTGACAATCGGCTCTCCGGTGCAATTCCTGCAACATTTGGATTCCTCGACTCATTGCAACAGCTCATGCTCTACAACAATTCTCTTGAAGGTAACCTTCCTCACCAGTTGATAAATATAGCAAACTTGACTAGAGTGAATCTTTCAAAGAACAGACTGAATGGTAGTATAGCTGCACTATGTAGCTCTCAATTGTTTATTTCTTTTGATGTTACCGACAATGAGTTTGATGGTGAAATTCCGCCTCAATTGGGAAACTCACCTTCCCTGAAGAGGCTAAGTTTAGGCAACAACAATTTTTCTGGTGAAATTCCAAGGACCTTGGGAAAACTTCATCACCTGTCATTGTTAGACCTGTCAGGAAATTCGCTCACCGGACCAATACCCACCGAGCTTTCTTTGTGTAATAAACTGGCTTACATTGATTTAAACAGTAATCTTCTTAATGGACAAATACCGTCATGGTTTGGAAAATTGCCTCAGTTGGGAGAGCTTAAGCTCTCTTCCAATAACTTTTCTGGACCTCTTCCATTAGGCCTATTCAAATGCTCCAAATTACTAGTTCTCTCTCTCAATGACAATTCACTCAATGGAAGCCTCCCAGCTGATATAGGAGAGCTTACATATCTTAATGTCCTCCGACTTGACATTAATGAGTTCTCGGGACCAATTCCTCGCGAGATAGGTAAGTTGAGCAAGCTTTATGAGCTTCAACTCTCTAGGAATAGCTTTAATGGTGAAATGCCAAGTGAGATCGGAAAGCTTCAAAATCTACAAGTCATTTTAGACCTTGGTTACAATAATCTCTCAGGTGGCATACCACCTTCTCTAGGGACTATGTCGAAATTAGAAACACTTGATCTTTCCCACAATCAACTCACTGGTGAAATCCCTCCACAAGTTGGTGAAATGAGCAGCTTGGAAAAGCTTGATCTCTCTTTCAACAACCTTCAAGGGAAATTGGACAAGAAATTCTCCCGGTGGCCAAATGAGGTATTTAAAGGAAACTTAAATCTTTGTGGAAGCCCTCTTGACCGTTGTGAAGGTGATGATACTTCTGGCAGTAAGCCGTCGGGCCTAAGCGAGTCATCGGTAGCGATAATATCTGTCGTTTCAACTTTAGCCGCAATTGCACTATTGATACTTTCAGCAAGAATCTTCTGCAAAAACAAGCAAGATTTTTCAAGGGAAGACAGCAAAGTGACTTCTTATGTCTACTCTTCCTCTTCGTCACAAGCACAGAGACGACCGCTTTTCCAGCTAAGAGCTGCTGGAAAGATGGATTTCAGGTGGGAAGATATTATGGATGCAACGAACAATCTAAATGATGAGTTCATGATTGGGTCAGGAGGTTCAGGGAAAATCTACAAAGCTGAGTTGGCCACTGGAGAGACTGTTGCTGTCAAGAAGATTTCATCAAAAGACGGTTTTCTGCTAAACAAAAGCTTCTTGAGAGAAGTTAATACACTGGGGAGAATAAAGCATAGACATCTGGTGAAGCTAATAGGGTTCTGTAGCAATAGAAACAAAGGAACGGGTTGGAATCTATTGATATATGAGTATATGGAGAATGGAAGTTTATGGGATTGGCTTCATGGAAAACCAGGCAATGCGAGGAAAGTAAAGAAGAGCCTTGATTGGGAGACAAGGTTCAAAATTGCTGTGGGATTAGCTCAAGGAGTGGAGTACCTGCACCACGATTGTACGCCGAAGATCATTCACAGAGATATCAAATCAAGCAACATATTGCTAGATTCCAAAATGGAGGCACACTTGGGAGATTTTGGACTGGCAAAAGCACTCATTGAAAGTGATGATGACTCGAACACTGAGTTGAATTCTTGTTTTGCCGGGTCTTATGGCTACATGGCTCCAGAGTATGCGTTCTCCCTGCATTCAACAGAAAAAAATGATGTTTTCAGCATGGGAATAGTTCTTATGGAACTTGTTAGTGGTAAAATGCCAACAAGTGACTTTTTTGGAGCTGATATGGACATGGTGAGATGGGTAGAGATGCATATTGACATGCATCGCTCTACCTGTGAGAAATTGATAGACCCTGAACTGAAACCTCTTTTACCTAGTGAAGAGTTTGCTGCATTTCAAGTGCTTGAGATAGCCTTGCGGTGCACGAAAGCTACACCACAGGAGAGGCCGTCTTCAAGGAAAGCATGTGATCTTCTTCTCCATGCATTCAACAACAGAATGACAGACTTTGGGAAGAAGAATCTGGATAATTACAAGTAA 3798 0.4179 MSISTFLVVVLFLVCSILVLGEEKLDKETTFRVLLEVKKSFVQDPENVLSDWSEENTDYCSWRGVSCGLNSLVEDSVHVVGLNLSYSSLTGSVSPELGRLKNLIFLDLSSNGLTGPIPLNLSNLVSLESLLLFSNQLNGSVPTEFGSLTSLRVMRLGDNALTGMIPASLGKLVKLVSLGLASCELTGSIPPELGQLGLLENLVLQENELIGPIPSELGNCSSLIAFTAANNKLNGSIPSELGQLENLQILNLGNNSLTGEIPSQLGNMSELVYLNFMGNQLEGAIPPSLAQLGNLQKLDLSMNKLSGGIPEEFGDMGQLSFMVLSGNNLNNVIPRTICSNATNLEHLMLSESGLYGEIPAELSQCQSLKQLDLSNNSLNGSIPLEIYGLVELTDLLLNNNSLVGFISPFIGNFSNLQTLALYHNNLKGDLPREIGMLGKLEILYLYDNQLSGAIPMEIGNCSSLQMIDFFGNRFKGEIPITIGRLKELNFLHLRQNELVGEIPASLGNCHKLKIMSLADNRLSGAIPATFGFLDSLQQLMLYNNSLEGNLPHQLINIANLTRVNLSKNRLNGSIAALCSSQLFISFDVTDNEFDGEIPPQLGNSPSLKRLSLGNNNFSGEIPRTLGKLHHLSLLDLSGNSLTGPIPTELSLCNKLAYIDLNSNLLNGQIPSWFGKLPQLGELKLSSNNFSGPLPLGLFKCSKLLVLSLNDNSLNGSLPADIGELTYLNVLRLDINEFSGPIPREIGKLSKLYELQLSRNSFNGEMPSEIGKLQNLQVILDLGYNNLSGGIPPSLGTMSKLETLDLSHNQLTGEIPPQVGEMSSLEKLDLSFNNLQGKLDKKFSRWPNEVFKGNLNLCGSPLDRCEGDDTSGSKPSGLSESSVAIISVVSTLAAIALLILSARIFCKNKQDFSREDSKVTSYVYSSSSSQAQRRPLFQLRAAGKMDFRWEDIMDATNNLNDEFMIGSGGSGKIYKAELATGETVAVKKISSKDGFLLNKSFLREVNTLGRIKHRHLVKLIGFCSNRNKGTGWNLLIYEYMENGSLWDWLHGKPGNARKVKKSLDWETRFKIAVGLAQGVEYLHHDCTPKIIHRDIKSSNILLDSKMEAHLGDFGLAKALIESDDDSNTELNSCFAGSYGYMAPEYAFSLHSTEKNDVFSMGIVLMELVSGKMPTSDFFGADMDMVRWVEMHIDMHRSTCEKLIDPELKPLLPSEEFAAFQVLEIALRCTKATPQERPSSRKACDLLLHAFNNRMTDFGKKNLDNYK* 1266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1993 1265 Gene3D Ribonuclease Inhibitor 578 872 IPR032675 -
Psa7g1993 1265 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 1259 - -
Psa7g1993 1265 SUPERFAMILY L domain-like 40 378 - -
Psa7g1993 1265 SMART LRR_typ_2 437 461 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 292 315 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 797 819 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 485 509 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 413 436 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 821 852 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 172 196 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 748 772 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 533 557 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 365 389 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 244 268 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 316 340 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 628 652 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 676 700 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 124 147 IPR003591 -
Psa7g1993 1265 SMART LRR_typ_2 148 171 IPR003591 -
Psa7g1993 1265 Pfam Leucine rich repeat N-terminal domain 33 67 IPR013210 -
Psa7g1993 1265 Gene3D Phosphorylase Kinase; domain 1 917 1038 - -
Psa7g1993 1265 Gene3D Ribonuclease Inhibitor 474 577 IPR032675 -
Psa7g1993 1265 Gene3D Transferase(Phosphotransferase) domain 1 1039 1262 - -
Psa7g1993 1265 Gene3D Ribonuclease Inhibitor 190 404 IPR032675 -
Psa7g1993 1265 SMART serkin_6 958 1250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1993 1265 Pfam Leucine rich repeat 511 570 IPR001611 GO:0005515
Psa7g1993 1265 Pfam Leucine Rich Repeat 606 628 IPR001611 GO:0005515
Psa7g1993 1265 Pfam Leucine Rich Repeat 246 267 IPR001611 GO:0005515
Psa7g1993 1265 PRINTS Leucine-rich repeat signature 368 381 - -
Psa7g1993 1265 PRINTS Leucine-rich repeat signature 797 810 - -
Psa7g1993 1265 Gene3D Ribonuclease Inhibitor 406 473 IPR032675 -
Psa7g1993 1265 Pfam Protein kinase domain 963 1242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1993 1265 SUPERFAMILY L domain-like 338 644 - -
Psa7g1993 1265 ProSiteProfiles Protein kinase domain profile. 958 1250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1993 1265 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Psa7g1993 1265 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 4 1259 - -
Psa7g1993 1265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1089 1101 IPR008271 GO:0004672|GO:0006468
Psa7g1993 1265 ProSiteProfiles Leucine-rich repeat profile. 799 821 IPR001611 GO:0005515
Psa7g1993 1265 SUPERFAMILY Protein kinase-like (PK-like) 942 1245 IPR011009 -
Psa7g1993 1265 SUPERFAMILY L domain-like 586 857 - -
Psa7g1993 1265 Pfam Leucine Rich repeats (2 copies) 799 837 IPR025875 -
Psa7g1993 1265 ProSitePatterns Protein kinases ATP-binding region signature. 964 987 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1993 Psa-Chr7 145403783 145408303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1993 13 742 Receptor kinase-like Gene Family AT1G17750 34.777 3.31e-100 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa7g1993 Pkinase 6.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1993 - - gmx:100801889 1989.54