Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1922 ATGTCTAATGTGAGGAACATCACTATTTTATATAACTGTGCTAATGACATCAAGATTCCGAATGGCGCGAACATGAACTCGTTTTCGTGCAAGGAGGATTCGAGCAAGCGCGCTTTTTATACGGATTCTGAAACAGCAGAGGGTGTTAAATGCGAAGGAGTTCGTGTTGATGTTCAGGTGACAAAGGAAGTGGAACTTGGTGGTGGAATTGAAGGGCTGAACAAGGCTTTGAGCAGAGGATTTGATGTGGAATATGTTGCAGATACTCAAAAATGCTTAAAATGTGTTTTAAGTAATGGAACTTGTGGAGGGAATGATATGTCTCAGTTTTCATGTTATTGTCCTGATGGAACTGAAGGTTTAGATTGTTCTTATCGCCGCGAGAATAGATGGAATTGGAAAAGAAAGGTTGCTGTAGGAGTTTCTGCTGCTGCTGTGGTCAGTGCAGTTTCTGTAGGCATTGCTTTCTACCTCTACTATTATTGCAGAAAGAAGAAAAAGAATGTTCATGCAGTATCCTCTACTGCACTATCTTACTGTGATTCTGGTTCTGGTTCAAAAGTCGCTGAAAATGGAGGTAGATATCTTGGAGTCCACTTCTTCACCTATAGTGAACTTGAAAAGGCCACAAACAACTTTGATTCTACCAGAGCACTAGGAGATGGAGGCTTTGGCACAGTCTATTTTGGAAAACTCCGGGACGGGCGTTTGATTGCGGTGAAACGCATGTATGAGAATAACTACAGAAGAGTTGAGCAATTTGTGAATGAAGTTGAGATCTTAACTCGTTTACACCATCAAAATCTTGTGTTATTATACGGGTGCACTTCACGCCACAGCCGCGAACTTCTGCTTGTATATGAATATGTCCCTAATGGAACTGTTGCTGATCATCTTCATGGTTCAAAAGCAAAACCTGGCATGTTACCTTGGCCTATCAGAATGAACATTGCAATAGAAACTGCTAGTGCATTGATTCAAAATGGAACATTGCATGAGCTTGTTGACCCTACACTTGGTTTTGAGTCAGATTTCAAGATAAGGAAAATGATCAATGCGGTCGCGGAGTTAGCATTTCAGTGTTTGCAGAGTTCTAAAGATGTTAGGCCTTCTATGGTAGAAGTGATGGAAAGGCTTAAAGATATTCAGAGTGATGATGGAACAAGTAAATGTAAACCTGAGGTGTTGGATATTTCAGGAGATGATGATAGTGCTTTGGTCAAGAATGAACCACCTCCATCATCACCAGATTCAAACATCAATACTTTTCCTTGA 1275 0.4071 MSNVRNITILYNCANDIKIPNGANMNSFSCKEDSSKRAFYTDSETAEGVKCEGVRVDVQVTKEVELGGGIEGLNKALSRGFDVEYVADTQKCLKCVLSNGTCGGNDMSQFSCYCPDGTEGLDCSYRRENRWNWKRKVAVGVSAAAVVSAVSVGIAFYLYYYCRKKKKNVHAVSSTALSYCDSGSGSKVAENGGRYLGVHFFTYSELEKATNNFDSTRALGDGGFGTVYFGKLRDGRLIAVKRMYENNYRRVEQFVNEVEILTRLHHQNLVLLYGCTSRHSRELLLVYEYVPNGTVADHLHGSKAKPGMLPWPIRMNIAIETASALIQNGTLHELVDPTLGFESDFKIRKMINAVAELAFQCLQSSKDVRPSMVEVMERLKDIQSDDGTSKCKPEVLDISGDDDSALVKNEPPPSSPDSNINTFP* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1922 424 MobiDBLite consensus disorder prediction 398 424 - -
Psa7g1922 424 Gene3D Phosphorylase Kinase; domain 1 188 289 - -
Psa7g1922 424 Pfam Protein tyrosine and serine/threonine kinase 216 323 IPR001245 GO:0004672|GO:0006468
Psa7g1922 424 ProSitePatterns Protein kinases ATP-binding region signature. 219 241 IPR017441 GO:0005524
Psa7g1922 424 ProSitePatterns EGF-like domain signature 1. 112 123 IPR000742 -
Psa7g1922 424 SUPERFAMILY Protein kinase-like (PK-like) 194 325 IPR011009 -
Psa7g1922 424 Pfam Wall-associated receptor kinase C-terminal 42 117 IPR032872 -
Psa7g1922 424 Gene3D Transferase(Phosphotransferase) domain 1 323 395 - -
Psa7g1922 424 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 326 420 IPR044652 -
Psa7g1922 424 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 325 IPR044652 -
Psa7g1922 424 SMART serkin_6 213 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1922 424 ProSiteProfiles Protein kinase domain profile. 213 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1922 424 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 3 325 - -
Psa7g1922 424 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 326 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1922 Psa-Chr7 141114453 141116820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1922 326 418 Receptor kinase-like Gene Family AT1G25390 42.157 3.39e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Psa7g1922 PK_Tyr_Ser-Thr 3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1922 - - gmx:100794703 413.305